Calcium in PDB 2qim: Crystal Structure of Pathogenesis-Related Protein Llpr-10.2B From Yellow Lupine in Complex with Cytokinin

The structure of Crystal Structure of Pathogenesis-Related Protein Llpr-10.2B From Yellow Lupine in Complex with Cytokinin, PDB code: 2qim was solved by H.C.Fernandes, O.Pasternak, G.Bujacz, A.Bujacz, M.M.Sikorski, M.Jaskolski, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.00 / 1.35
Space group	P 65
Cell size a, b, c (Å), α, β, γ (°)	73.822, 73.822, 67.212, 90.00, 90.00, 120.00
R / Rfree (%)	14.7 / 19.4

The binding sites of Calcium atom in the Crystal Structure of Pathogenesis-Related Protein Llpr-10.2B From Yellow Lupine in Complex with Cytokinin (pdb code 2qim). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Pathogenesis-Related Protein Llpr-10.2B From Yellow Lupine in Complex with Cytokinin, PDB code: 2qim:

Calcium binding site 1 out of 1 in the Crystal Structure of Pathogenesis-Related Protein Llpr-10.2B From Yellow Lupine in Complex with Cytokinin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Pathogenesis-Related Protein Llpr-10.2B From Yellow Lupine in Complex with Cytokinin within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca158 b:28.6 occ:1.00 O A:HOH260 2.2 37.7 1.0 O A:PRO31 2.2 24.8 1.0 O A:ILE37 2.3 18.5 1.0 O A:VAL34 2.4 17.5 1.0 O A:HOH183 2.4 23.6 1.0 O A:HOH247 2.7 36.8 1.0 C A:PRO31 3.3 23.1 1.0 C A:ILE37 3.4 18.5 1.0 C A:VAL34 3.4 18.6 1.0 CA A:PRO31 3.8 21.1 1.0 CA A:GLU35 3.9 17.1 1.0 N A:ILE37 4.0 17.1 1.0 C A:GLU35 4.1 18.1 1.0 N A:GLU35 4.1 17.6 1.0 O A:GLU35 4.2 18.5 1.0 CA A:ILE37 4.3 16.9 1.0 O A:HOH348 4.3 48.7 1.0 N A:GLN38 4.4 18.9 1.0 N A:VAL34 4.4 19.5 1.0 N A:LYS32 4.5 22.0 1.0 CA A:GLN38 4.5 20.1 1.0 CA A:VAL34 4.5 18.4 1.0 O A:HOH369 4.6 58.8 1.0 CB A:PRO31 4.6 25.0 1.0 O A:ILE30 4.6 21.1 1.0 N A:THR36 4.6 16.4 1.0 C A:LYS32 4.8 22.3 1.0 O A:LYS32 4.8 25.4 1.0 CB A:ILE37 4.8 17.5 1.0 OE2 A:GLU35 4.8 22.9 0.3 CA A:LYS32 4.9 22.7 1.0 C A:THR36 5.0 15.2 1.0

H.Fernandes, O.Pasternak, G.Bujacz, A.Bujacz, M.M.Sikorski, M.Jaskolski. Lupinus Luteus Pathogenesis-Related Protein As A Reservoir For Cytokinin. J.Mol.Biol. V. 378 1040 2008.
ISSN: ISSN 0022-2836
PubMed: 18406424
DOI: 10.1016/J.JMB.2008.03.027