Atomistry » Calcium » PDB 2q97-2qwc » 2qub
Atomistry »
  Calcium »
    PDB 2q97-2qwc »
      2qub »

Calcium in PDB 2qub: Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens

Enzymatic activity of Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens

All present enzymatic activity of Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens:
3.1.1.3;

Protein crystallography data

The structure of Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens, PDB code: 2qub was solved by R.Meier, U.Baumann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.93 / 1.80
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 202.401, 202.401, 317.731, 90.00, 90.00, 120.00
R / Rfree (%) 17.1 / 20

Calcium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 48;

Binding sites:

The binding sites of Calcium atom in the Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens (pdb code 2qub). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 48 binding sites of Calcium where determined in the Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens, PDB code: 2qub:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Calcium binding site 1 out of 48 in 2qub

Go back to Calcium Binding Sites List in 2qub
Calcium binding site 1 out of 48 in the Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca614

b:23.1
occ:1.00
O A:ALA510 2.3 19.4 1.0
O A:GLY491 2.3 22.1 1.0
OD1 A:ASP513 2.3 20.2 1.0
O A:GLY508 2.3 17.0 1.0
OD2 A:ASP495 2.3 18.0 1.0
O A:GLY493 2.3 19.2 1.0
CG A:ASP513 3.0 20.0 1.0
OD2 A:ASP513 3.1 16.7 1.0
CG A:ASP495 3.3 22.7 1.0
C A:GLY491 3.5 23.4 1.0
C A:GLY508 3.5 18.8 1.0
C A:ALA510 3.5 20.9 1.0
C A:GLY493 3.6 20.8 1.0
N A:GLY491 3.9 22.4 1.0
C A:ASN509 4.0 20.4 1.0
N A:GLY493 4.0 23.2 1.0
O A:ASN509 4.0 22.7 1.0
CB A:ASP495 4.1 20.2 1.0
N A:ALA510 4.1 22.1 1.0
C A:ASP492 4.1 24.5 1.0
OD1 A:ASP495 4.2 27.6 1.0
N A:ASP495 4.2 20.4 1.0
CA A:GLY491 4.3 22.6 1.0
CA A:GLY493 4.3 21.9 1.0
CA A:GLY511 4.4 18.9 1.0
CA A:GLY508 4.4 16.6 1.0
N A:GLY511 4.4 20.2 1.0
N A:ASN509 4.4 18.3 1.0
N A:ASP492 4.4 22.6 1.0
CA A:ALA510 4.4 19.3 1.0
CB A:ASP513 4.5 17.9 1.0
CA A:ASN509 4.5 19.9 1.0
CB A:ASN509 4.5 19.3 1.0
CA A:ASP492 4.5 24.6 1.0
N A:ASP494 4.6 18.6 1.0
O A:ASP492 4.6 24.4 1.0
C A:GLY490 4.6 22.2 1.0
C A:GLY511 4.6 18.2 1.0
O A:GLY511 4.7 18.9 1.0
CA A:ASP494 4.7 19.4 1.0
CA A:CA616 4.8 21.5 1.0
CA A:ASP495 4.8 21.4 1.0
CA A:GLY490 4.8 21.8 1.0
C A:ASP494 4.9 19.7 1.0

Calcium binding site 2 out of 48 in 2qub

Go back to Calcium Binding Sites List in 2qub
Calcium binding site 2 out of 48 in the Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca615

b:20.7
occ:1.00
O A:HOH705 2.3 19.8 1.0
OD2 A:ASP532 2.3 20.1 1.0
O A:PHE549 2.3 19.3 1.0
O A:GLY530 2.4 19.0 1.0
OD1 A:ASP552 2.4 21.7 1.0
O A:GLY528 2.4 22.9 1.0
CG A:ASP552 3.2 25.6 1.0
OD2 A:ASP552 3.3 30.8 1.0
CG A:ASP532 3.4 19.9 1.0
C A:PHE549 3.5 20.9 1.0
C A:GLY530 3.6 17.9 1.0
C A:GLY528 3.6 22.7 1.0
C A:SER529 3.9 18.6 1.0
O A:SER529 3.9 17.8 1.0
CB A:ASP532 4.1 19.0 1.0
N A:ASP532 4.1 19.1 1.0
N A:GLY528 4.1 20.5 1.0
C A:GLY527 4.1 20.0 1.0
N A:GLY530 4.2 19.0 1.0
CA A:PHE549 4.4 19.6 1.0
OD1 A:ASP532 4.4 19.5 1.0
CA A:SER529 4.4 20.7 1.0
N A:GLY550 4.4 19.4 1.0
O A:GLY527 4.4 19.1 1.0
CA A:GLY530 4.4 17.3 1.0
CA A:GLY550 4.5 20.6 1.0
N A:SER529 4.5 21.1 1.0
N A:ASP531 4.5 17.9 1.0
CA A:GLY528 4.5 21.0 1.0
CB A:PHE549 4.5 19.6 1.0
CA A:GLY527 4.5 20.4 1.0
CA A:ASP531 4.6 19.8 1.0
CB A:ASP552 4.7 20.3 1.0
C A:GLY550 4.7 20.1 1.0
CA A:CA616 4.7 21.5 1.0
CA A:ASP532 4.8 19.1 1.0
C A:ASP531 4.8 18.9 1.0
O A:HOH661 4.8 17.6 1.0
N A:ARG551 4.9 21.2 1.0
CD1 A:PHE549 4.9 20.1 1.0

Calcium binding site 3 out of 48 in 2qub

Go back to Calcium Binding Sites List in 2qub
Calcium binding site 3 out of 48 in the Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca616

b:21.5
occ:1.00
OD2 A:ASP513 2.3 16.7 1.0
O A:ASN509 2.3 22.7 1.0
OD1 A:ASP532 2.3 19.5 1.0
O A:SER529 2.4 17.8 1.0
O A:GLY527 2.4 19.1 1.0
O A:GLY511 2.4 18.9 1.0
OD2 A:ASP532 3.0 20.1 1.0
CG A:ASP532 3.0 19.9 1.0
CG A:ASP513 3.5 20.0 1.0
C A:GLY527 3.5 20.0 1.0
C A:GLY511 3.6 18.2 1.0
C A:ASN509 3.6 20.4 1.0
C A:SER529 3.6 18.6 1.0
C A:ALA510 3.9 20.9 1.0
C A:GLY528 4.0 22.7 1.0
O A:ALA510 4.0 19.4 1.0
N A:GLY511 4.0 20.2 1.0
O A:GLY528 4.1 22.9 1.0
N A:ASP513 4.2 18.4 1.0
CB A:ASP513 4.2 17.9 1.0
N A:SER529 4.2 21.1 1.0
C A:GLY508 4.2 18.8 1.0
CA A:ALA510 4.3 19.3 1.0
CA A:GLY528 4.3 21.0 1.0
N A:GLY528 4.3 20.5 1.0
N A:ASN509 4.3 18.3 1.0
CA A:GLY511 4.4 18.9 1.0
N A:ALA510 4.4 22.1 1.0
OD1 A:ASP513 4.4 20.2 1.0
CA A:GLY530 4.4 17.3 1.0
N A:GLY530 4.4 19.0 1.0
O A:GLY508 4.5 17.0 1.0
CA A:GLY527 4.5 20.4 1.0
CB A:ASP532 4.5 19.0 1.0
C A:GLY530 4.5 17.9 1.0
N A:ASN512 4.5 18.4 1.0
O A:GLY530 4.6 19.0 1.0
CA A:ASN509 4.6 19.9 1.0
CA A:GLY508 4.6 16.6 1.0
CA A:SER529 4.6 20.7 1.0
CA A:ASN512 4.7 18.5 1.0
CA A:CA615 4.7 20.7 1.0
CA A:CA614 4.8 23.1 1.0
CA A:ASP513 4.9 20.4 1.0
C A:ASN512 4.9 18.7 1.0

Calcium binding site 4 out of 48 in 2qub

Go back to Calcium Binding Sites List in 2qub
Calcium binding site 4 out of 48 in the Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca617

b:14.8
occ:1.00
O A:GLY403 2.3 19.1 1.0
O A:GLY384 2.4 20.8 1.0
OD2 A:ASP388 2.4 21.9 1.0
OD1 A:ASN406 2.4 21.4 1.0
O A:GLY386 2.4 19.9 1.0
OD2 A:ASP401 2.4 19.2 1.0
OD1 A:ASP401 2.4 23.7 1.0
CG A:ASP401 2.8 20.9 1.0
CG A:ASN406 3.3 22.4 1.0
CG A:ASP388 3.4 26.6 1.0
C A:GLY384 3.5 20.9 1.0
C A:GLY403 3.5 18.8 1.0
C A:GLY386 3.6 20.5 1.0
ND2 A:ASN406 3.6 19.8 1.0
CB A:ASP388 3.8 22.1 1.0
N A:GLY403 3.9 21.0 1.0
N A:GLY384 4.1 20.8 1.0
N A:ASP388 4.1 19.6 1.0
N A:GLY386 4.2 21.5 1.0
C A:LYS385 4.2 22.2 1.0
O A:HOH653 4.2 19.9 1.0
CB A:ASP401 4.3 19.2 1.0
CA A:GLY403 4.3 20.1 1.0
C A:GLY383 4.4 19.2 1.0
CA A:GLY384 4.4 21.5 1.0
N A:LYS385 4.4 21.6 1.0
OD1 A:ASP388 4.4 26.6 1.0
N A:ASN387 4.5 19.7 1.0
CA A:ASN387 4.5 21.5 1.0
C A:ASN387 4.5 20.2 1.0
CA A:GLY386 4.5 21.4 1.0
N A:GLY404 4.5 19.1 1.0
CA A:LYS385 4.6 22.6 1.0
N A:ALA402 4.6 21.9 1.0
CA A:ASP388 4.6 21.7 1.0
O A:LYS385 4.6 20.6 1.0
CB A:ASN406 4.6 19.4 1.0
CA A:GLY404 4.7 19.7 1.0
CA A:GLY383 4.8 20.4 1.0
O A:GLY383 4.8 21.1 1.0
C A:GLY404 4.9 20.1 1.0
O A:HOH688 5.0 22.0 1.0

Calcium binding site 5 out of 48 in 2qub

Go back to Calcium Binding Sites List in 2qub
Calcium binding site 5 out of 48 in the Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca618

b:16.7
occ:1.00
O A:GLY410 2.3 21.9 1.0
O A:LYS412 2.3 19.9 1.0
O A:GLY395 2.4 20.6 1.0
O A:ARG393 2.4 20.0 1.0
OD1 A:ASN415 2.4 19.9 1.0
OD2 A:ASP397 2.4 21.2 1.0
CG A:ASN415 3.3 21.3 1.0
CG A:ASP397 3.4 19.2 1.0
C A:GLY410 3.5 22.4 1.0
C A:GLY395 3.6 21.6 1.0
ND2 A:ASN415 3.6 19.1 1.0
C A:LYS412 3.6 21.7 1.0
C A:ARG393 3.6 22.1 1.0
C A:ASP394 3.8 20.2 1.0
O A:ASP394 3.8 19.2 1.0
C A:GLY411 4.0 23.1 1.0
N A:GLY395 4.0 21.2 1.0
CB A:ASP397 4.0 19.5 1.0
N A:LYS412 4.2 23.3 1.0
O A:GLY411 4.2 21.6 1.0
CA A:GLY411 4.2 23.4 1.0
CA A:ASP394 4.2 20.9 1.0
N A:ASP397 4.3 19.5 1.0
C A:GLY392 4.3 21.0 1.0
N A:GLY411 4.3 20.6 1.0
O A:GLY392 4.3 21.2 1.0
CA A:GLY395 4.4 22.1 1.0
N A:ASP394 4.4 20.7 1.0
OD1 A:ASP397 4.4 20.4 1.0
N A:ARG393 4.5 18.2 1.0
CA A:CA619 4.5 16.0 1.0
N A:GLY413 4.5 22.1 1.0
CA A:LYS412 4.5 21.5 1.0
CA A:GLY413 4.6 22.4 1.0
N A:ASP396 4.6 21.7 1.0
CA A:GLY410 4.6 21.3 1.0
CA A:GLY392 4.6 21.1 1.0
CA A:ARG393 4.7 20.9 1.0
CB A:ASN415 4.7 19.5 1.0
CA A:ASP396 4.8 19.9 1.0
CA A:ASP397 4.8 18.4 1.0
C A:ASP396 4.9 20.3 1.0

Calcium binding site 6 out of 48 in 2qub

Go back to Calcium Binding Sites List in 2qub
Calcium binding site 6 out of 48 in the Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca619

b:16.0
occ:1.00
O A:GLY392 2.3 21.2 1.0
O A:ASP394 2.3 19.2 1.0
OD2 A:ASP379 2.3 20.1 1.0
OD1 A:ASP397 2.4 20.4 1.0
O A:GLY377 2.4 20.9 1.0
O A:SER375 2.4 21.0 1.0
OD2 A:ASP397 2.6 21.2 1.0
CG A:ASP397 2.8 19.2 1.0
CG A:ASP379 3.4 23.2 1.0
C A:GLY392 3.5 21.0 1.0
C A:ASP394 3.6 20.2 1.0
C A:SER375 3.6 22.2 1.0
C A:GLY377 3.6 21.6 1.0
O A:ARG393 4.0 20.0 1.0
C A:ARG393 4.0 22.1 1.0
N A:GLY377 4.1 21.7 1.0
N A:SER375 4.1 22.1 1.0
CB A:ASP379 4.2 19.8 1.0
N A:ASP379 4.2 19.6 1.0
OD1 A:ASP379 4.2 21.7 1.0
C A:ASP376 4.2 21.7 1.0
N A:ASP394 4.3 20.7 1.0
CA A:GLY392 4.3 21.1 1.0
CB A:ASP397 4.3 19.5 1.0
CA A:GLY395 4.4 22.1 1.0
CA A:ASP376 4.4 22.4 1.0
N A:GLY395 4.4 21.2 1.0
N A:ARG393 4.4 18.2 1.0
OG A:SER375 4.5 22.9 1.0
CA A:GLY377 4.5 21.4 1.0
CA A:SER375 4.5 22.1 1.0
N A:ASP376 4.5 22.3 1.0
O A:GLY395 4.5 20.6 1.0
CA A:CA618 4.5 16.7 1.0
C A:GLY395 4.5 21.6 1.0
CA A:ARG393 4.5 20.9 1.0
CA A:ASP394 4.6 20.9 1.0
CB A:ARG393 4.6 20.4 1.0
N A:ASN378 4.6 19.3 1.0
CA A:ASN378 4.7 20.5 1.0
O A:ASP376 4.8 21.7 1.0
C A:ASN378 4.8 20.9 1.0
CA A:ASP379 4.8 20.7 1.0
C A:GLY374 4.9 21.5 1.0

Calcium binding site 7 out of 48 in 2qub

Go back to Calcium Binding Sites List in 2qub
Calcium binding site 7 out of 48 in the Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca620

b:14.8
occ:1.00
OD1 A:ASN285 2.3 19.9 1.0
O A:HOH625 2.4 13.8 1.0
O A:HOH638 2.4 17.1 1.0
OE1 A:GLU254 2.4 21.2 1.0
OD2 A:ASP276 2.4 21.6 1.0
O A:ASN284 2.4 19.6 1.0
OD1 A:ASP276 2.4 18.9 1.0
CG A:ASP276 2.7 20.4 1.0
C A:ASN284 3.5 20.2 1.0
CG A:ASN285 3.5 20.9 1.0
CD A:GLU254 3.6 24.7 1.0
CA A:ASN285 4.0 19.7 1.0
CB A:GLU254 4.1 23.6 1.0
N A:ASN285 4.2 19.6 1.0
CB A:ASN285 4.2 20.2 1.0
CB A:ASP276 4.3 20.4 1.0
O A:HOH706 4.3 19.8 1.0
O A:ASP276 4.3 22.6 1.0
CB A:ASN284 4.4 18.1 1.0
CG A:GLU254 4.4 23.0 1.0
OE2 A:GLU254 4.5 22.4 1.0
ND2 A:ASN285 4.5 18.9 1.0
CA A:ASN284 4.5 18.8 1.0
O A:HOH632 4.5 17.7 1.0
NH1 A:ARG260 4.5 18.4 1.0
CB A:ALA363 4.6 22.4 1.0
NE2 A:HIS366 4.7 23.6 1.0
CD2 A:HIS366 4.7 23.7 1.0
N A:GLU364 4.7 20.8 1.0
NH2 A:ARG260 4.9 19.4 1.0
O A:GLU364 4.9 19.7 1.0
CB A:GLU364 4.9 21.4 1.0

Calcium binding site 8 out of 48 in 2qub

Go back to Calcium Binding Sites List in 2qub
Calcium binding site 8 out of 48 in the Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca621

b:17.4
occ:1.00
O A:HOH678 2.3 18.1 1.0
O A:THR118 2.3 19.1 1.0
OD2 A:ASP153 2.3 21.4 1.0
OE1 A:GLN120 2.4 21.4 1.0
OD2 A:ASP157 2.4 22.4 1.0
O A:SER144 2.4 20.8 1.0
OD1 A:ASP157 2.5 20.8 1.0
CG A:ASP157 2.8 22.8 1.0
CD A:GLN120 3.4 20.4 1.0
CG A:ASP153 3.5 23.4 1.0
C A:THR118 3.5 19.8 1.0
C A:SER144 3.5 22.4 1.0
NE2 A:GLN120 3.8 23.0 1.0
OD1 A:ASP153 3.9 22.6 1.0
CB A:THR118 4.2 19.1 1.0
CA A:GLY145 4.2 22.4 1.0
N A:SER144 4.3 23.4 1.0
N A:GLY145 4.3 22.8 1.0
O A:GLY142 4.3 22.9 1.0
CB A:ASP157 4.3 19.8 1.0
O A:ASP153 4.4 23.4 1.0
CA A:THR118 4.4 19.6 1.0
OG1 A:THR118 4.4 19.3 1.0
N A:ALA119 4.4 19.9 1.0
CA A:ALA119 4.5 17.8 1.0
CA A:SER144 4.5 22.9 1.0
N A:GLN120 4.6 18.9 1.0
C A:ALA119 4.7 18.9 1.0
CB A:ASP153 4.7 20.3 1.0
CG A:GLN120 4.7 20.0 1.0
O A:HOH641 4.8 17.1 1.0
O A:HOH650 4.8 18.5 1.0
CD A:ARG141 4.8 20.9 1.0
C A:ASP153 4.8 22.6 1.0
CB A:GLN120 5.0 18.0 1.0

Calcium binding site 9 out of 48 in 2qub

Go back to Calcium Binding Sites List in 2qub
Calcium binding site 9 out of 48 in the Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 9 of Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca614

b:20.3
occ:1.00
OD1 C:ASP513 2.3 20.8 1.0
OD2 C:ASP495 2.3 20.9 1.0
O C:ALA510 2.3 20.1 1.0
O C:GLY491 2.3 22.5 1.0
O C:GLY508 2.3 16.8 1.0
O C:GLY493 2.4 19.3 1.0
CG C:ASP513 3.0 19.2 1.0
OD2 C:ASP513 3.1 20.9 1.0
CG C:ASP495 3.4 22.5 1.0
C C:GLY491 3.5 24.0 1.0
C C:GLY508 3.5 19.4 1.0
C C:ALA510 3.6 18.6 1.0
C C:GLY493 3.6 22.0 1.0
C C:ASN509 3.9 19.6 1.0
O C:ASN509 3.9 22.1 1.0
N C:GLY491 4.0 23.3 1.0
N C:GLY493 4.0 24.0 1.0
N C:ASP495 4.1 21.5 1.0
CB C:ASP495 4.1 21.6 1.0
N C:ALA510 4.1 18.1 1.0
C C:ASP492 4.2 25.2 1.0
OD1 C:ASP495 4.2 25.1 1.0
CA C:GLY491 4.3 24.5 1.0
CA C:GLY508 4.4 18.8 1.0
CA C:GLY493 4.4 22.6 1.0
N C:ASP492 4.4 23.8 1.0
N C:ASN509 4.4 18.0 1.0
CB C:ASP513 4.5 17.7 1.0
N C:GLY511 4.5 20.0 1.0
CA C:ALA510 4.5 19.1 1.0
CA C:ASN509 4.5 20.0 1.0
CA C:GLY511 4.5 19.2 1.0
CB C:ASN509 4.5 19.9 1.0
O C:ASP492 4.5 26.1 1.0
N C:ASP494 4.5 21.5 1.0
CA C:ASP492 4.6 25.7 1.0
O C:HOH827 4.6 28.6 1.0
C C:GLY490 4.7 23.4 1.0
C C:GLY511 4.7 19.5 1.0
CA C:ASP494 4.7 21.2 1.0
O C:GLY511 4.8 16.6 1.0
CA C:CA616 4.8 18.3 1.0
CA C:ASP495 4.8 22.1 1.0
CA C:GLY490 4.9 22.1 1.0
C C:ASP494 4.9 22.5 1.0

Calcium binding site 10 out of 48 in 2qub

Go back to Calcium Binding Sites List in 2qub
Calcium binding site 10 out of 48 in the Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 10 of Crystal Structure of Extracellular Lipase Lipa From Serratia Marcescens within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca615

b:16.4
occ:1.00
O C:PHE549 2.3 20.1 1.0
O C:HOH751 2.3 16.9 1.0
OD2 C:ASP532 2.3 20.2 1.0
O C:GLY530 2.3 18.4 1.0
O C:GLY528 2.4 20.1 1.0
OD1 C:ASP552 2.4 19.9 1.0
CG C:ASP552 3.3 24.9 1.0
C C:PHE549 3.5 20.4 1.0
CG C:ASP532 3.5 22.6 1.0
OD2 C:ASP552 3.5 30.9 1.0
C C:GLY530 3.5 19.8 1.0
C C:GLY528 3.6 20.8 1.0
C C:SER529 3.9 20.1 1.0
O C:SER529 3.9 20.2 1.0
C C:GLY527 4.1 20.8 1.0
N C:ASP532 4.1 19.7 1.0
N C:GLY528 4.2 19.3 1.0
CB C:ASP532 4.2 19.9 1.0
N C:GLY530 4.2 18.2 1.0
CA C:PHE549 4.3 20.8 1.0
O C:GLY527 4.4 20.2 1.0
N C:ASP531 4.4 18.9 1.0
CA C:SER529 4.4 21.1 1.0
N C:GLY550 4.4 20.8 1.0
CA C:GLY550 4.4 20.8 1.0
CA C:GLY530 4.5 18.6 1.0
OD1 C:ASP532 4.5 19.3 1.0
N C:SER529 4.5 19.6 1.0
CA C:GLY528 4.5 22.5 1.0
CB C:PHE549 4.5 21.0 1.0
CA C:ASP531 4.5 20.3 1.0
CA C:GLY527 4.5 18.9 1.0
C C:GLY550 4.6 21.6 1.0
CA C:CA616 4.7 18.3 1.0
CB C:ASP552 4.7 18.8 1.0
C C:ASP531 4.8 19.2 1.0
O C:HOH634 4.8 14.1 1.0
CA C:ASP532 4.8 19.5 1.0
N C:ARG551 4.8 19.4 1.0
CD1 C:PHE549 4.9 22.1 1.0

Reference:

R.Meier, T.Drepper, V.Svensson, K.E.Jaeger, U.Baumann. A Calcium-Gated Lid and A Large Beta-Roll Sandwich Are Revealed By the Crystal Structure of Extracellular Lipase From Serratia Marcescens. J.Biol.Chem. V. 282 31477 2007.
ISSN: ISSN 0021-9258
PubMed: 17728256
DOI: 10.1074/JBC.M704942200
Page generated: Sat Dec 12 03:51:20 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy