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Calcium in PDB 2rgc: Crystal Structure of H-RASQ61V-Gppnhp

Protein crystallography data

The structure of Crystal Structure of H-RASQ61V-Gppnhp, PDB code: 2rgc was solved by G.Buhrman, G.Wink, C.Mattos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.28 / 1.60
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 88.430, 88.430, 132.690, 90.00, 90.00, 120.00
R / Rfree (%) 19.1 / 21.3

Other elements in 2rgc:

The structure of Crystal Structure of H-RASQ61V-Gppnhp also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of H-RASQ61V-Gppnhp (pdb code 2rgc). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of H-RASQ61V-Gppnhp, PDB code: 2rgc:

Calcium binding site 1 out of 1 in 2rgc

Go back to Calcium Binding Sites List in 2rgc
Calcium binding site 1 out of 1 in the Crystal Structure of H-RASQ61V-Gppnhp


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of H-RASQ61V-Gppnhp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca602

b:19.3
occ:1.00
O A:HOH639 2.3 30.1 1.0
OE2 A:GLU31 2.3 20.5 1.0
O A:HOH642 2.4 23.6 1.0
OD2 A:ASP33 2.5 27.5 1.0
OD1 A:ASP33 2.5 25.1 1.0
CG A:ASP33 2.8 23.0 1.0
CD A:GLU31 3.5 18.4 1.0
CG A:GLU31 4.0 18.1 1.0
O A:HOH741 4.3 48.7 1.0
CB A:ASP33 4.4 20.6 1.0
O A:HOH633 4.5 42.3 1.0
OE1 A:GLU31 4.5 19.7 1.0
O A:HOH627 4.7 29.5 1.0
O A:HOH687 4.7 37.0 1.0
CB A:GLU31 4.7 17.7 1.0
O A:HOH731 4.8 33.8 1.0

Reference:

G.Buhrman, G.Wink, C.Mattos. Transformation Efficiency of RASQ61 Mutants Linked to Structural Features of the Switch Regions in the Presence of Raf. Structure V. 15 1618 2007.
ISSN: ISSN 0969-2126
PubMed: 18073111
DOI: 10.1016/J.STR.2007.10.011
Page generated: Sat Dec 12 03:52:09 2020

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