Calcium in PDB 2rob: Solution Structure of Calcium Bound Soybean Calmodulin Isoform 4 C-Terminal Domain

The binding sites of Calcium atom in the Solution Structure of Calcium Bound Soybean Calmodulin Isoform 4 C-Terminal Domain (pdb code 2rob). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Solution Structure of Calcium Bound Soybean Calmodulin Isoform 4 C-Terminal Domain, PDB code: 2rob:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Solution Structure of Calcium Bound Soybean Calmodulin Isoform 4 C-Terminal Domain


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Solution Structure of Calcium Bound Soybean Calmodulin Isoform 4 C-Terminal Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca221 b:0.0 occ:1.00 O A:TYR99 2.6 0.0 1.0 HB2 A:ASP95 2.6 0.0 1.0 OD1 A:ASP93 2.6 0.0 1.0 OD1 A:ASN97 2.6 0.0 1.0 OE2 A:GLU104 2.6 0.0 1.0 OD2 A:ASP95 2.6 0.0 1.0 OE1 A:GLU104 2.6 0.0 1.0 HD22 A:ASN97 2.7 0.0 1.0 CD A:GLU104 2.8 0.0 1.0 H A:ASP95 3.0 0.0 1.0 CG A:ASN97 3.0 0.0 1.0 ND2 A:ASN97 3.1 0.0 1.0 HA A:ASP93 3.2 0.0 1.0 H A:ASN97 3.3 0.0 1.0 HA A:ILE100 3.3 0.0 1.0 CB A:ASP95 3.4 0.0 1.0 H A:SER101 3.4 0.0 1.0 CG A:ASP95 3.4 0.0 1.0 HB3 A:SER101 3.7 0.0 1.0 C A:TYR99 3.8 0.0 1.0 N A:ASP95 3.8 0.0 1.0 CG A:ASP93 3.8 0.0 1.0 HD21 A:ASN97 3.8 0.0 1.0 H A:GLN96 3.9 0.0 1.0 CA A:ASP95 4.0 0.0 1.0 N A:SER101 4.1 0.0 1.0 CA A:ASP93 4.1 0.0 1.0 CG A:GLU104 4.1 0.0 1.0 HG3 A:GLU104 4.1 0.0 1.0 H A:TYR99 4.1 0.0 1.0 CA A:ILE100 4.2 0.0 1.0 N A:ASN97 4.2 0.0 1.0 HB3 A:ASP95 4.2 0.0 1.0 C A:ASP93 4.2 0.0 1.0 N A:GLN96 4.3 0.0 1.0 CB A:ASN97 4.3 0.0 1.0 C A:ASP95 4.4 0.0 1.0 HB3 A:ASN97 4.4 0.0 1.0 H A:LYS94 4.4 0.0 1.0 N A:LYS94 4.4 0.0 1.0 N A:ILE100 4.5 0.0 1.0 C A:ILE100 4.6 0.0 1.0 OD1 A:ASP95 4.6 0.0 1.0 CB A:ASP93 4.6 0.0 1.0 CB A:SER101 4.6 0.0 1.0 OD2 A:ASP93 4.6 0.0 1.0 O A:ASP93 4.8 0.0 1.0 N A:TYR99 4.8 0.0 1.0 HB2 A:GLU104 4.8 0.0 1.0 HG2 A:GLU104 4.8 0.0 1.0 CA A:ASN97 4.8 0.0 1.0 CA A:TYR99 4.8 0.0 1.0 O A:PHE92 4.9 0.0 1.0 C A:LYS94 4.9 0.0 1.0 OG A:SER101 4.9 0.0 1.0 HB2 A:TYR99 4.9 0.0 1.0 CB A:GLU104 5.0 0.0 1.0 CA A:SER101 5.0 0.0 1.0 HB3 A:LYS94 5.0 0.0 1.0

Calcium binding site 2 out of 2 in the Solution Structure of Calcium Bound Soybean Calmodulin Isoform 4 C-Terminal Domain


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Solution Structure of Calcium Bound Soybean Calmodulin Isoform 4 C-Terminal Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca234 b:0.0 occ:1.00 O A:GLN135 2.6 0.0 1.0 OE2 A:GLU140 2.6 0.0 1.0 OD2 A:ASP131 2.6 0.0 1.0 OE1 A:GLU140 2.6 0.0 1.0 OD1 A:ASP129 2.6 0.0 1.0 OD1 A:ASP133 2.6 0.0 1.0 OD2 A:ASP133 2.7 0.0 1.0 OD1 A:ASP131 2.8 0.0 1.0 CG A:ASP133 2.8 0.0 1.0 CD A:GLU140 2.9 0.0 1.0 CG A:ASP131 3.0 0.0 1.0 HB2 A:ASN137 3.0 0.0 1.0 H A:ASN137 3.1 0.0 1.0 HB3 A:ASN137 3.5 0.0 1.0 CB A:ASN137 3.7 0.0 1.0 N A:ASN137 3.7 0.0 1.0 CG A:ASP129 3.7 0.0 1.0 C A:GLN135 3.8 0.0 1.0 H A:ASP131 3.8 0.0 1.0 HE2 A:TYR99 3.8 0.0 1.0 HA A:VAL136 3.9 0.0 1.0 HB3 A:ASP133 4.0 0.0 1.0 H A:ASP133 4.0 0.0 1.0 CB A:ASP133 4.0 0.0 1.0 HA A:ASP129 4.1 0.0 1.0 H A:GLN135 4.2 0.0 1.0 CG A:GLU140 4.3 0.0 1.0 HD2 A:TYR99 4.3 0.0 1.0 CA A:ASN137 4.3 0.0 1.0 OD2 A:ASP129 4.3 0.0 1.0 H A:LEU130 4.4 0.0 1.0 CB A:ASP131 4.4 0.0 1.0 HG3 A:GLU140 4.4 0.0 1.0 C A:VAL136 4.4 0.0 1.0 CA A:VAL136 4.5 0.0 1.0 HB2 A:GLN135 4.6 0.0 1.0 N A:VAL136 4.6 0.0 1.0 HB3 A:ASP131 4.6 0.0 1.0 HB2 A:GLU140 4.6 0.0 1.0 HB3 A:GLN135 4.7 0.0 1.0 HB2 A:ASP133 4.7 0.0 1.0 N A:ASP131 4.7 0.0 1.0 CA A:GLN135 4.7 0.0 1.0 CE2 A:TYR99 4.7 0.0 1.0 N A:GLN135 4.8 0.0 1.0 N A:ASP133 4.8 0.0 1.0 HA A:ASN137 4.8 0.0 1.0 CB A:ASP129 4.9 0.0 1.0 HG2 A:GLU140 4.9 0.0 1.0 CB A:GLN135 4.9 0.0 1.0 CD2 A:TYR99 4.9 0.0 1.0 CA A:ASP129 4.9 0.0 1.0 CG A:ASN137 5.0 0.0 1.0 H A:GLY134 5.0 0.0 1.0

H.Ishida, H.Huang, A.P.Yamniuk, Y.Takaya, H.J.Vogel. The Solution Structures of Two Soybean Calmodulin Isoforms Provide A Structural Basis For Their Selective Target Activation Properties J.Biol.Chem. V. 283 14619 2008.
ISSN: ISSN 0021-9258
PubMed: 18347016
DOI: 10.1074/JBC.M801398200