Calcium in PDB 2tmv: Visualization of Protein-Nucleic Acid Interactions in A Virus. Refined Structure of Intact Tobacco Mosaic Virus at 2.9 Angstroms Resolution By X-Ray Fiber Diffraction

The binding sites of Calcium atom in the Visualization of Protein-Nucleic Acid Interactions in A Virus. Refined Structure of Intact Tobacco Mosaic Virus at 2.9 Angstroms Resolution By X-Ray Fiber Diffraction (pdb code 2tmv). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Visualization of Protein-Nucleic Acid Interactions in A Virus. Refined Structure of Intact Tobacco Mosaic Virus at 2.9 Angstroms Resolution By X-Ray Fiber Diffraction, PDB code: 2tmv:

Calcium binding site 1 out of 1 in the Visualization of Protein-Nucleic Acid Interactions in A Virus. Refined Structure of Intact Tobacco Mosaic Virus at 2.9 Angstroms Resolution By X-Ray Fiber Diffraction


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Visualization of Protein-Nucleic Acid Interactions in A Virus. Refined Structure of Intact Tobacco Mosaic Virus at 2.9 Angstroms Resolution By X-Ray Fiber Diffraction within 5.0Å range: probe atom residue distance (Å) B Occ R:Ca4 b:37.3 occ:0.46 OP1 R:A2 2.2 44.8 1.0 OD2 P:ASP116 2.3 31.1 1.0 OP2 R:A2 2.3 43.9 1.0 P R:A2 2.7 45.0 1.0 O R:HOH11 2.8 37.9 0.8 O R:HOH35 2.9 36.9 0.6 CG P:ASP116 3.0 29.5 1.0 O4' R:A3 3.1 43.6 1.0 O2' R:G1 3.1 45.8 1.0 OD1 P:ASP116 3.3 29.6 1.0 C4' R:A3 3.5 43.7 1.0 O3' R:G1 3.8 45.1 1.0 C2' R:G1 4.0 45.7 1.0 O5' R:A2 4.0 45.0 1.0 C1' R:A3 4.1 43.5 1.0 CB P:ASP116 4.2 28.6 1.0 O5' R:A3 4.3 43.9 1.0 C5' R:A3 4.3 43.7 1.0 O2' R:A3 4.5 43.7 1.0 C3' R:G1 4.5 45.4 1.0 C5' R:A2 4.6 45.4 1.0 C3' R:A3 4.7 43.8 1.0 C2' R:A3 4.7 43.8 1.0 O R:HOH10 4.9 45.5 0.9

K.Namba, R.Pattanayek, G.Stubbs. Visualization of Protein-Nucleic Acid Interactions in A Virus. Refined Structure of Intact Tobacco Mosaic Virus at 2.9 A Resolution By X-Ray Fiber Diffraction. J.Mol.Biol. V. 208 307 1989.
ISSN: ISSN 0022-2836
PubMed: 2769760
DOI: 10.1016/0022-2836(89)90391-4