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Atomistry » Calcium » PDB 2tga-2v5c » 2v4r | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Atomistry » Calcium » PDB 2tga-2v5c » 2v4r » |
Calcium in PDB 2v4r: Non-Productive Complex of the Y-Family Dna Polymerase DPO4 with Dgtp Skipping the M1DG Adduct to Pair with the Next Template CytosineEnzymatic activity of Non-Productive Complex of the Y-Family Dna Polymerase DPO4 with Dgtp Skipping the M1DG Adduct to Pair with the Next Template Cytosine
All present enzymatic activity of Non-Productive Complex of the Y-Family Dna Polymerase DPO4 with Dgtp Skipping the M1DG Adduct to Pair with the Next Template Cytosine:
2.7.7.7; Protein crystallography data
The structure of Non-Productive Complex of the Y-Family Dna Polymerase DPO4 with Dgtp Skipping the M1DG Adduct to Pair with the Next Template Cytosine, PDB code: 2v4r
was solved by
R.L.Eoff,
J.B.Stafford,
J.Szekely,
C.J.Rizzo,
M.Egli,
F.P.Guengerich,
L.J.Marnett,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Calcium Binding Sites:
The binding sites of Calcium atom in the Non-Productive Complex of the Y-Family Dna Polymerase DPO4 with Dgtp Skipping the M1DG Adduct to Pair with the Next Template Cytosine
(pdb code 2v4r). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 3 binding sites of Calcium where determined in the Non-Productive Complex of the Y-Family Dna Polymerase DPO4 with Dgtp Skipping the M1DG Adduct to Pair with the Next Template Cytosine, PDB code: 2v4r: Jump to Calcium binding site number: 1; 2; 3; Calcium binding site 1 out of 3 in 2v4rGo back to Calcium Binding Sites List in 2v4r
Calcium binding site 1 out
of 3 in the Non-Productive Complex of the Y-Family Dna Polymerase DPO4 with Dgtp Skipping the M1DG Adduct to Pair with the Next Template Cytosine
Mono view Stereo pair view
Calcium binding site 2 out of 3 in 2v4rGo back to Calcium Binding Sites List in 2v4r
Calcium binding site 2 out
of 3 in the Non-Productive Complex of the Y-Family Dna Polymerase DPO4 with Dgtp Skipping the M1DG Adduct to Pair with the Next Template Cytosine
Mono view Stereo pair view
Calcium binding site 3 out of 3 in 2v4rGo back to Calcium Binding Sites List in 2v4r
Calcium binding site 3 out
of 3 in the Non-Productive Complex of the Y-Family Dna Polymerase DPO4 with Dgtp Skipping the M1DG Adduct to Pair with the Next Template Cytosine
Mono view Stereo pair view
Reference:
R.L.Eoff,
J.B.Stafford,
J.Szekely,
C.J.Rizzo,
M.Egli,
F.P.Guengerich,
L.J.Marnett.
Structural and Functional Analysis of Sulfolobus Solfataricus Y-Family Dna Polymerase DPO4-Catalyzed Bypass of the Malondialdehyde-Deoxyguanosine Adduct. Biochemistry V. 48 7079 2009.
Page generated: Sat Dec 12 03:53:10 2020
ISSN: ISSN 0006-2960 PubMed: 19492857 DOI: 10.1021/BI9003588 |
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