Calcium in PDB 2vf9: Crystal Structure of Bacteriophage PRR1

The structure of Crystal Structure of Bacteriophage PRR1, PDB code: 2vf9 was solved by M.Persson, K.Tars, L.Liljas, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.12 / 3.50
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	281.400, 285.400, 472.500, 93.27, 90.00, 119.44
R / Rfree (%)	31.1 / 31.3

The binding sites of Calcium atom in the Crystal Structure of Bacteriophage PRR1 (pdb code 2vf9). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Bacteriophage PRR1, PDB code: 2vf9:

Calcium binding site 1 out of 1 in the Crystal Structure of Bacteriophage PRR1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Bacteriophage PRR1 within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca1132 b:16.1 occ:1.00 OE1 C:GLN2 2.3 28.0 1.0 O B:TYR131 2.3 33.8 1.0 CD C:GLN2 3.3 26.6 1.0 C B:TYR131 3.6 32.3 1.0 NE2 C:GLN2 3.8 29.2 1.0 NE2 A:GLN2 4.1 40.9 1.0 OXT B:TYR131 4.4 32.7 1.0 CB B:TYR131 4.5 30.7 1.0 CD2 B:TYR131 4.5 28.9 1.0 CA B:TYR131 4.6 30.7 1.0 CG C:GLN2 4.6 24.8 1.0 N C:LEU3 4.7 24.9 1.0 O C:LEU3 4.7 25.2 1.0 CB C:GLN2 4.8 23.4 1.0 CG B:TYR131 5.0 27.1 1.0

M.Persson, K.Tars, L.Liljas. The Capsid of the Small Rna Phage PRR1 Is Stabilized By Metal Ions J.Mol.Biol. V. 383 914 2008.
ISSN: ISSN 0022-2836
PubMed: 18786545
DOI: 10.1016/J.JMB.2008.08.060