Atomistry » Calcium » PDB 2v5d-2vjj » 2vfq
Atomistry »
  Calcium »
    PDB 2v5d-2vjj »
      2vfq »

Calcium in PDB 2vfq: Low Temperature Structure of P22 Tailspike Protein Fragment (109-666), Mutant V450A

Protein crystallography data

The structure of Low Temperature Structure of P22 Tailspike Protein Fragment (109-666), Mutant V450A, PDB code: 2vfq was solved by M.Becker, J.J.Mueller, U.Heinemann, R.Seckler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.55
Space group P 21 3
Cell size a, b, c (Å), α, β, γ (°) 119.990, 119.990, 119.990, 90.00, 90.00, 90.00
R / Rfree (%) 11.4 / 14.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Low Temperature Structure of P22 Tailspike Protein Fragment (109-666), Mutant V450A (pdb code 2vfq). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Low Temperature Structure of P22 Tailspike Protein Fragment (109-666), Mutant V450A, PDB code: 2vfq:

Calcium binding site 1 out of 1 in 2vfq

Go back to Calcium Binding Sites List in 2vfq
Calcium binding site 1 out of 1 in the Low Temperature Structure of P22 Tailspike Protein Fragment (109-666), Mutant V450A


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Low Temperature Structure of P22 Tailspike Protein Fragment (109-666), Mutant V450A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1673

b:9.1
occ:0.18
O A:LEU663 2.3 12.2 1.0
O A:HOH2796 2.5 24.1 1.0
C A:LEU663 3.2 11.2 1.0
CA A:LEU663 3.9 11.2 1.0
N A:ALA664 4.1 11.4 1.0
O A:THR662 4.3 11.0 1.0
CA A:ALA664 4.4 11.1 1.0
CD1 A:LEU663 4.7 13.6 1.0
N A:LEU663 4.8 12.2 1.0
O A:HOH2798 4.8 36.0 1.0
C A:THR662 4.9 12.8 1.0

Reference:

M.Becker, J.J.Mueller, T.Weikl, U.Heinemann, R.Seckler. Side-Chain Stacking and Beta-Helix Stability in P22 Tailspike Protein To Be Published.
Page generated: Sat Dec 12 03:53:48 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy