Calcium in PDB 2vsh: Synthesis of Cdp-Activated Ribitol For Teichoic Acid Precursors in Streptococcus Pneumoniae

All present enzymatic activity of Synthesis of Cdp-Activated Ribitol For Teichoic Acid Precursors in Streptococcus Pneumoniae:
2.7.7.60;

The structure of Synthesis of Cdp-Activated Ribitol For Teichoic Acid Precursors in Streptococcus Pneumoniae, PDB code: 2vsh was solved by S.Baur, J.Marles-Wright, S.Buckenmaier, R.J.Lewis, W.Vollmer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.93 / 2.00
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	81.000, 93.380, 144.190, 90.00, 90.00, 90.00
R / Rfree (%)	19.6 / 25.4

The binding sites of Calcium atom in the Synthesis of Cdp-Activated Ribitol For Teichoic Acid Precursors in Streptococcus Pneumoniae (pdb code 2vsh). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Synthesis of Cdp-Activated Ribitol For Teichoic Acid Precursors in Streptococcus Pneumoniae, PDB code: 2vsh:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Synthesis of Cdp-Activated Ribitol For Teichoic Acid Precursors in Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Synthesis of Cdp-Activated Ribitol For Teichoic Acid Precursors in Streptococcus Pneumoniae within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1234 b:18.9 occ:1.00 O A:HOH2075 2.4 24.4 1.0 O A:HOH2076 2.5 20.8 1.0 OD2 A:ASP97 2.5 28.1 1.0 OD1 A:ASP97 2.6 24.0 1.0 CG A:ASP97 2.9 25.5 1.0 CB A:ASP97 4.4 23.3 1.0 N A:LEU102 4.4 26.7 1.0 O A:HOH2073 4.4 23.7 1.0 CA A:PRO101 4.8 28.7 1.0 CB A:PRO101 4.8 30.7 1.0 O A:HOH2040 4.9 21.0 1.0 O A:HOH2074 4.9 31.0 1.0 O A:HOH2039 5.0 29.7 1.0 CB A:LEU102 5.0 25.4 1.0

Calcium binding site 2 out of 2 in the Synthesis of Cdp-Activated Ribitol For Teichoic Acid Precursors in Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Synthesis of Cdp-Activated Ribitol For Teichoic Acid Precursors in Streptococcus Pneumoniae within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1240 b:48.8 occ:1.00 O A:HOH2132 2.5 24.2 1.0 O A:HOH2127 3.1 28.4 1.0 OE2 A:GLU191 4.4 32.0 1.0 OE2 A:GLU188 4.5 26.9 1.0 OE1 A:GLU191 4.6 31.2 1.0 CD A:GLU191 5.0 30.1 1.0

S.Baur, J.Marles-Wright, S.Buckenmaier, R.J.Lewis, W.Vollmer. Synthesis of Cdp-Activated Ribitol For Teichoic Acid Precursors in Streptococcus Pneumoniae. J.Bacteriol. V. 191 1200 2009.
ISSN: ISSN 0021-9193
PubMed: 19074383
DOI: 10.1128/JB.01120-08