Atomistry » Calcium » PDB 2vvc-2w3j » 2w3e
Atomistry »
  Calcium »
    PDB 2vvc-2w3j »
      2w3e »

Calcium in PDB 2w3e: Oxidized Structure of the First Gaf Domain of Mycobacterium Tuberculosis Doss

Protein crystallography data

The structure of Oxidized Structure of the First Gaf Domain of Mycobacterium Tuberculosis Doss, PDB code: 2w3e was solved by B.S.Kang, H.Y.Cho, H.J.Cho, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.56 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 36.000, 86.865, 100.642, 90.00, 90.00, 90.00
R / Rfree (%) 19.957 / 23.404

Other elements in 2w3e:

The structure of Oxidized Structure of the First Gaf Domain of Mycobacterium Tuberculosis Doss also contains other interesting chemical elements:

Iron (Fe) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Oxidized Structure of the First Gaf Domain of Mycobacterium Tuberculosis Doss (pdb code 2w3e). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Oxidized Structure of the First Gaf Domain of Mycobacterium Tuberculosis Doss, PDB code: 2w3e:

Calcium binding site 1 out of 1 in 2w3e

Go back to Calcium Binding Sites List in 2w3e
Calcium binding site 1 out of 1 in the Oxidized Structure of the First Gaf Domain of Mycobacterium Tuberculosis Doss


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Oxidized Structure of the First Gaf Domain of Mycobacterium Tuberculosis Doss within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1206

b:41.3
occ:1.00
O A:HOH2119 2.1 25.2 1.0
OD2 A:ASP183 2.3 24.1 1.0
OD1 A:ASP183 2.8 13.2 1.0
CG A:ASP183 2.9 18.7 1.0
CB A:ASP183 4.4 12.9 1.0
NH2 A:ARG132 4.9 15.2 1.0

Reference:

H.Y.Cho, H.J.Cho, Y.M.Kim, J.I.Oh, B.S.Kang. Structural Insight Into the Heme-Based Redox Sensing By Doss From Mycobacterium Tuberculosis. J.Biol.Chem. V. 284 13057 2009.
ISSN: ISSN 0021-9258
PubMed: 19276084
DOI: 10.1074/JBC.M808905200
Page generated: Sat Dec 12 03:55:05 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy