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Calcium in PDB 2wor: Co-Structure of S100A7 with 1,8 Ans

Protein crystallography data

The structure of Co-Structure of S100A7 with 1,8 Ans, PDB code: 2wor was solved by R.Leon, F.Hof, M.J.Boulanger, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.27 / 1.70
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 51.660, 51.660, 117.240, 90.00, 90.00, 90.00
R / Rfree (%) 18.673 / 21.211

Other elements in 2wor:

The structure of Co-Structure of S100A7 with 1,8 Ans also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Co-Structure of S100A7 with 1,8 Ans (pdb code 2wor). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Co-Structure of S100A7 with 1,8 Ans, PDB code: 2wor:

Calcium binding site 1 out of 1 in 2wor

Go back to Calcium Binding Sites List in 2wor
Calcium binding site 1 out of 1 in the Co-Structure of S100A7 with 1,8 Ans


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Co-Structure of S100A7 with 1,8 Ans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1097

b:10.4
occ:1.00
OD1 A:ASP62 2.3 9.2 1.0
O A:HOH2074 2.4 13.4 1.0
OD1 A:ASN64 2.4 10.2 1.0
O A:LYS68 2.4 13.1 1.0
OE1 A:GLU73 2.4 10.2 1.0
OD1 A:ASP66 2.4 10.6 1.0
OE2 A:GLU73 2.5 10.8 1.0
CD A:GLU73 2.8 9.0 1.0
CG A:ASP66 3.3 12.2 1.0
CG A:ASP62 3.4 11.3 1.0
CG A:ASN64 3.5 12.3 1.0
C A:LYS68 3.5 10.8 1.0
OD2 A:ASP66 3.8 14.9 1.0
ND2 A:ASN64 4.0 19.5 1.0
CA A:ASP62 4.2 10.0 1.0
N A:LYS68 4.2 11.8 1.0
N A:ASP66 4.3 10.1 1.0
CB A:ASP62 4.3 9.6 1.0
CG A:GLU73 4.3 9.1 1.0
N A:ASN64 4.3 10.8 1.0
C A:ASP62 4.4 11.1 1.0
OD2 A:ASP62 4.4 10.2 1.0
CA A:ILE69 4.4 9.8 1.0
N A:ILE69 4.5 10.2 1.0
CA A:LYS68 4.5 12.1 1.0
OD2 A:ASP70 4.5 16.0 1.0
N A:LYS63 4.5 8.5 1.0
CB A:ASP66 4.5 12.9 1.0
N A:ASP70 4.5 8.4 1.0
N A:GLU65 4.6 9.8 1.0
CB A:ASN64 4.7 11.4 1.0
CA A:ASP66 4.8 13.8 1.0
N A:LYS67 4.8 12.6 1.0
CB A:LYS68 4.8 15.0 1.0
CG A:ASP70 4.8 14.5 1.0
CA A:ASN64 4.8 10.6 1.0
C A:ASN64 4.9 10.7 1.0
O A:HOH2080 4.9 13.8 1.0
C A:ILE69 5.0 8.9 1.0

Reference:

R.Leon, J.I.Murray, G.Cragg, B.Farnell, N.R.West, T.C.Pace, P.H.Watson, C.Bohne, M.J.Boulanger, F.Hof. Identification and Characterization of Binding Sites on S100A7, A Participant in Cancer and Inflammation Pathways. Biochemistry V. 48 10591 2009.
ISSN: ISSN 0006-2960
PubMed: 19810752
DOI: 10.1021/BI901330G
Page generated: Fri Jul 12 18:47:21 2024

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