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Calcium in PDB 2xc1: Full-Length Tailspike Protein Mutant Y108W of Bacteriophage P22

Protein crystallography data

The structure of Full-Length Tailspike Protein Mutant Y108W of Bacteriophage P22, PDB code: 2xc1 was solved by J.J.Mueller, A.Seul, R.Seckler, U.Heinemann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.45 / 1.65
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 86.358, 121.558, 208.255, 90.00, 90.00, 90.00
R / Rfree (%) 16.5 / 21

Calcium Binding Sites:

The binding sites of Calcium atom in the Full-Length Tailspike Protein Mutant Y108W of Bacteriophage P22 (pdb code 2xc1). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Full-Length Tailspike Protein Mutant Y108W of Bacteriophage P22, PDB code: 2xc1:

Calcium binding site 1 out of 1 in 2xc1

Go back to Calcium Binding Sites List in 2xc1
Calcium binding site 1 out of 1 in the Full-Length Tailspike Protein Mutant Y108W of Bacteriophage P22


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Full-Length Tailspike Protein Mutant Y108W of Bacteriophage P22 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1670

b:24.9
occ:1.00
O A:LEU663 2.3 10.5 1.0
O C:LEU663 2.3 9.9 1.0
O C:HOH2728 2.4 14.0 1.0
O B:LEU663 2.4 12.0 1.0
O B:HOH2736 2.4 9.6 1.0
O A:HOH2762 2.4 7.3 1.0
C A:LEU663 3.2 10.9 1.0
C C:LEU663 3.3 9.7 1.0
C B:LEU663 3.3 12.8 1.0
CA A:LEU663 3.9 10.7 1.0
CA C:LEU663 4.0 11.2 1.0
CA B:LEU663 4.0 9.5 1.0
N A:ALA664 4.1 11.9 1.0
O A:HOH2764 4.2 38.3 1.0
N C:ALA664 4.2 10.4 1.0
N B:ALA664 4.2 10.5 1.0
O C:THR662 4.3 11.5 1.0
CA A:ALA664 4.3 12.4 1.0
CA B:ALA664 4.4 10.9 1.0
O A:THR662 4.4 12.3 1.0
CA C:ALA664 4.4 10.1 1.0
O B:THR662 4.5 13.5 1.0
CD1 A:LEU663 4.7 12.2 1.0
CD1 C:LEU663 4.7 9.7 1.0
CD1 B:LEU663 4.8 10.0 1.0
N C:LEU663 4.8 10.7 1.0
N A:LEU663 4.8 10.1 1.0
C C:THR662 4.9 9.3 1.0
N B:LEU663 4.9 14.4 1.0
C A:THR662 5.0 10.6 1.0

Reference:

A.Seul, J.J.Mueller, D.Andres, E.Stettner, U.Heinemann, R.Seckler. Bacteriophage P22 Tailspike: Structure of the Complete Protein and Function of the Interdomain Linker Acta Crystallogr.,Sect.D V. 70 1336 2014.
ISSN: ISSN 0907-4449
PubMed: 24816102
DOI: 10.1107/S1399004714002685
Page generated: Sat Dec 12 03:58:03 2020

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