Atomistry » Calcium » PDB 2xqg-2y6h » 2xy8
Atomistry »
  Calcium »
    PDB 2xqg-2y6h »
      2xy8 »

Calcium in PDB 2xy8: Paramagnetic-Based uc(Nmr) Structure of the Complex Between the N- Terminal Epsilon Domain and the Theta Domain of the Dna Polymerase III

Enzymatic activity of Paramagnetic-Based uc(Nmr) Structure of the Complex Between the N- Terminal Epsilon Domain and the Theta Domain of the Dna Polymerase III

All present enzymatic activity of Paramagnetic-Based uc(Nmr) Structure of the Complex Between the N- Terminal Epsilon Domain and the Theta Domain of the Dna Polymerase III:
2.7.7.7;

Calcium Binding Sites:

The binding sites of Calcium atom in the Paramagnetic-Based uc(Nmr) Structure of the Complex Between the N- Terminal Epsilon Domain and the Theta Domain of the Dna Polymerase III (pdb code 2xy8). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Paramagnetic-Based uc(Nmr) Structure of the Complex Between the N- Terminal Epsilon Domain and the Theta Domain of the Dna Polymerase III, PDB code: 2xy8:

Calcium binding site 1 out of 1 in 2xy8

Go back to Calcium Binding Sites List in 2xy8
Calcium binding site 1 out of 1 in the Paramagnetic-Based uc(Nmr) Structure of the Complex Between the N- Terminal Epsilon Domain and the Theta Domain of the Dna Polymerase III


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Paramagnetic-Based uc(Nmr) Structure of the Complex Between the N- Terminal Epsilon Domain and the Theta Domain of the Dna Polymerase III within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca190

b:1.0
occ:1.00
OD2 A:ASP12 1.7 1.0 1.0
OE2 A:GLU14 1.7 1.0 1.0
OD2 A:ASP167 1.7 1.0 1.0
CG A:ASP12 2.7 1.0 1.0
CG A:ASP167 2.8 1.0 1.0
OD1 A:ASP12 2.9 1.0 1.0
CD A:GLU14 3.0 1.0 1.0
CB A:ASP167 3.3 1.0 1.0
OE1 A:GLU14 3.8 1.0 1.0
OD1 A:ASP167 3.8 1.0 1.0
CG A:GLU14 4.0 1.0 1.0
CB A:ASP12 4.0 1.0 1.0
CA A:ALA164 4.2 1.0 1.0
H A:ASP167 4.6 1.0 1.0
CB A:ALA164 4.7 1.0 1.0
CA A:ASP167 4.8 1.0 1.0
O A:ALA164 4.8 1.0 1.0
O A:GLY163 4.8 1.0 1.0
N A:ALA164 4.8 1.0 1.0
C A:ASP12 5.0 1.0 1.0
C A:ALA164 5.0 1.0 1.0

Reference:

C.Schmitz, A.M.J.J.Bonvin. Protein-Protein Haddocking Using Exclusively Pseudocontact Shifts. J.Biomol.uc(Nmr) V. 50 263 2011.
ISSN: ISSN 0925-2738
PubMed: 21626213
DOI: 10.1007/S10858-011-9514-4
Page generated: Fri Jul 12 19:17:14 2024

Last articles

Mg in 4Y52
Mg in 4Y30
Mg in 4Y2V
Mg in 4Y2X
Mg in 4Y2Y
Mg in 4Y2U
Mg in 4Y2T
Mg in 4Y2Q
Mg in 4Y2R
Mg in 4Y2S
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy