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Calcium in PDB 2zj7: Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase

Enzymatic activity of Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase

All present enzymatic activity of Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase:
3.1.1.3;

Protein crystallography data

The structure of Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase, PDB code: 2zj7 was solved by C.Angkawidjaja, K.Kuwahara, S.Kanaya, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.21
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 48.634, 84.627, 87.521, 90.00, 96.85, 90.00
R / Rfree (%) 16.4 / 23.4

Other elements in 2zj7:

The structure of Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase (pdb code 2zj7). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 10 binding sites of Calcium where determined in the Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase, PDB code: 2zj7:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Calcium binding site 1 out of 10 in 2zj7

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Calcium binding site 1 out of 10 in the Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca618

b:19.9
occ:1.00
OD1 A:ASN284 2.3 18.4 1.0
OE2 A:GLU253 2.4 24.1 1.0
OD2 A:ASP275 2.4 22.2 1.0
O A:ASP283 2.5 21.7 1.0
O A:HOH687 2.5 22.8 1.0
O A:HOH859 2.5 20.2 1.0
OD1 A:ASP275 2.6 28.9 1.0
CG A:ASP275 2.9 24.1 1.0
CD A:GLU253 3.3 24.9 1.0
CG A:ASN284 3.4 18.4 1.0
C A:ASP283 3.5 21.0 1.0
CG A:GLU253 3.8 23.2 1.0
CA A:ASN284 4.1 17.3 1.0
O A:ASP275 4.1 23.1 1.0
O A:HOH894 4.2 25.4 1.0
N A:ASN284 4.2 18.3 1.0
ND2 A:ASN284 4.2 19.4 1.0
CB A:ASN284 4.2 14.8 1.0
OE1 A:GLU253 4.3 23.1 1.0
CB A:ASP283 4.3 19.2 1.0
CD2 A:HIS365 4.3 13.8 1.0
CB A:ASP275 4.4 21.8 1.0
NE2 A:HIS365 4.4 15.3 1.0
NH1 A:ARG259 4.4 18.4 1.0
CA A:ASP283 4.5 20.3 1.0
CB A:GLU253 4.5 21.9 1.0
CB A:ALA362 4.6 28.9 1.0
N A:GLU363 4.7 28.7 1.0
O A:GLU363 4.7 28.6 1.0
NH2 A:ARG259 4.9 13.3 1.0

Calcium binding site 2 out of 10 in 2zj7

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Calcium binding site 2 out of 10 in the Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca619

b:18.9
occ:1.00
OD2 A:ASP283 2.1 20.2 1.0
O A:HOH680 2.4 20.7 1.0
O A:LYS278 2.4 23.6 1.0
O A:ALA281 2.4 22.2 1.0
OD1 A:ASP337 2.5 23.5 1.0
OD2 A:ASP337 2.7 28.1 1.0
CG A:ASP337 3.0 25.4 1.0
CG A:ASP283 3.2 22.1 1.0
C A:LYS278 3.5 22.5 1.0
C A:ALA281 3.6 20.7 1.0
N A:LYS278 3.8 24.7 1.0
OD1 A:ASP283 4.0 18.7 1.0
CB A:ASP283 4.1 19.2 1.0
O A:GLU279 4.2 19.9 1.0
N A:ALA281 4.3 18.6 1.0
CA A:LYS278 4.3 23.3 1.0
N A:ASP283 4.3 20.7 1.0
CA A:ALA281 4.3 19.9 1.0
N A:GLU279 4.4 22.2 1.0
O A:HOH728 4.4 47.3 1.0
C A:GLU279 4.4 21.4 1.0
CB A:ASP337 4.5 21.4 1.0
O A:HOH856 4.5 56.6 1.0
CA A:GLU279 4.5 22.2 1.0
CG A:LYS336 4.5 18.8 1.0
N A:THR282 4.6 21.1 1.0
CE A:LYS336 4.7 26.8 1.0
C A:PRO277 4.7 24.9 1.0
CB A:ALA281 4.7 19.9 1.0
O A:HOH875 4.7 23.5 1.0
O A:HOH743 4.8 44.0 1.0
CB A:PRO277 4.8 25.5 1.0
CA A:THR282 4.8 19.6 1.0
CA A:ASP283 4.8 20.3 1.0
CA A:PRO277 4.9 25.4 1.0
C A:THR282 4.9 21.3 1.0

Calcium binding site 3 out of 10 in 2zj7

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Calcium binding site 3 out of 10 in the Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca620

b:25.4
occ:1.00
OD2 A:ASP378 2.2 25.8 1.0
O A:SER374 2.3 25.0 1.0
O A:SER376 2.3 29.5 1.0
O A:ALA393 2.3 23.1 1.0
O A:GLY391 2.4 21.2 1.0
OD1 A:ASP396 2.4 28.8 1.0
CG A:ASP396 3.2 28.0 1.0
OD2 A:ASP396 3.2 25.8 1.0
CG A:ASP378 3.4 28.9 1.0
C A:SER374 3.4 25.1 1.0
C A:SER376 3.5 29.0 1.0
C A:ALA393 3.5 23.8 1.0
C A:GLY391 3.6 20.2 1.0
O A:ARG392 3.8 22.6 1.0
N A:SER376 3.9 27.0 1.0
C A:ARG392 3.9 21.9 1.0
N A:SER374 4.0 25.4 1.0
N A:ALA393 4.1 21.4 1.0
C A:ASP375 4.1 27.1 1.0
N A:ASP378 4.2 27.6 1.0
OD1 A:ASP378 4.2 26.3 1.0
CB A:ASP378 4.2 27.2 1.0
OG A:SER374 4.3 25.3 1.0
CA A:SER374 4.3 25.2 1.0
N A:ASP375 4.3 25.7 1.0
CA A:SER376 4.3 28.2 1.0
CA A:ASP375 4.3 26.2 1.0
CA A:GLY391 4.3 19.4 1.0
CB A:ARG392 4.3 21.0 1.0
CA A:GLY394 4.4 24.6 1.0
N A:GLY394 4.4 24.6 1.0
N A:ASN377 4.5 29.2 1.0
CA A:ALA393 4.5 22.2 1.0
N A:ARG392 4.5 21.1 1.0
CA A:ARG392 4.5 21.1 1.0
CA A:ASN377 4.6 29.1 1.0
CB A:ASP396 4.6 27.9 1.0
CA A:CA622 4.6 27.9 1.0
C A:GLY394 4.6 26.4 1.0
O A:GLY394 4.7 27.1 1.0
C A:ASN377 4.7 28.8 1.0
O A:ASP375 4.8 29.0 1.0
C A:GLY373 4.8 24.3 1.0
CA A:ASP378 4.9 27.9 1.0
CB A:SER374 4.9 24.9 1.0
CA A:GLY373 5.0 23.4 1.0

Calcium binding site 4 out of 10 in 2zj7

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Calcium binding site 4 out of 10 in the Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca621

b:26.2
occ:1.00
O A:GLY385 2.3 26.8 1.0
O A:GLY402 2.4 32.8 1.0
OD1 A:ASN405 2.4 24.1 1.0
O A:GLY383 2.5 29.0 1.0
OD2 A:ASP400 2.5 30.1 1.0
OD2 A:ASP387 2.6 22.8 1.0
OD1 A:ASP400 2.6 28.9 1.0
CG A:ASP400 2.9 31.5 1.0
CG A:ASP387 3.4 25.7 1.0
CG A:ASN405 3.4 26.2 1.0
C A:GLY385 3.5 26.1 1.0
C A:GLY402 3.6 31.8 1.0
C A:GLY383 3.6 30.3 1.0
CB A:ASP387 3.7 24.8 1.0
ND2 A:ASN405 3.9 25.6 1.0
N A:GLY402 4.0 33.2 1.0
N A:GLY383 4.1 27.3 1.0
N A:ASP387 4.2 23.2 1.0
N A:GLY385 4.2 29.0 1.0
O A:HOH648 4.3 29.5 1.0
C A:SER384 4.3 31.2 1.0
N A:ASN386 4.3 25.5 1.0
CB A:ASP400 4.4 31.2 1.0
CA A:ASN386 4.4 24.5 1.0
CA A:SER384 4.4 31.5 1.0
CA A:GLY402 4.4 31.9 1.0
N A:SER384 4.4 31.1 1.0
C A:GLY382 4.4 25.0 1.0
C A:ASN386 4.5 23.7 1.0
N A:GLY401 4.5 32.8 1.0
CA A:GLY383 4.5 28.6 1.0
OD1 A:ASP387 4.5 25.9 1.0
CA A:GLY385 4.5 27.2 1.0
N A:GLY403 4.5 30.4 1.0
CA A:ASP387 4.6 24.3 1.0
CA A:GLY403 4.7 29.2 1.0
CB A:ASN405 4.7 23.9 1.0
CA A:GLY382 4.7 24.4 1.0
C A:GLY401 4.8 34.6 1.0
O A:SER384 4.8 32.0 1.0
O A:GLY382 5.0 25.0 1.0
CA A:ASP400 5.0 32.1 1.0
C A:ASP400 5.0 32.9 1.0
C A:GLY403 5.0 29.5 1.0

Calcium binding site 5 out of 10 in 2zj7

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Calcium binding site 5 out of 10 in the Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca622

b:27.9
occ:1.00
O A:GLY409 2.2 29.4 1.0
O A:ALA411 2.3 26.9 1.0
OD2 A:ASP396 2.3 25.8 1.0
OD1 A:ASN414 2.3 30.2 1.0
O A:GLY394 2.5 27.1 1.0
O A:ARG392 2.5 22.6 1.0
CG A:ASN414 3.3 29.9 1.0
C A:GLY409 3.4 28.1 1.0
CG A:ASP396 3.4 28.0 1.0
C A:ALA411 3.5 28.5 1.0
C A:GLY394 3.6 26.4 1.0
C A:ARG392 3.7 21.9 1.0
ND2 A:ASN414 3.7 27.6 1.0
C A:ALA393 3.8 23.8 1.0
O A:ALA393 3.9 23.1 1.0
C A:GLY410 4.0 28.0 1.0
N A:GLY394 4.0 24.6 1.0
CA A:ALA393 4.1 22.2 1.0
N A:ALA411 4.1 27.6 1.0
N A:ASP396 4.2 29.4 1.0
O A:GLY410 4.2 28.2 1.0
CB A:ASP396 4.2 27.9 1.0
OD1 A:ASP396 4.2 28.8 1.0
N A:GLY410 4.3 26.8 1.0
CA A:GLY410 4.3 27.5 1.0
C A:GLY391 4.4 20.2 1.0
CA A:GLY409 4.4 27.6 1.0
N A:ALA393 4.4 21.4 1.0
CA A:GLY394 4.4 24.6 1.0
CA A:ALA411 4.4 27.6 1.0
O A:GLY391 4.4 21.2 1.0
N A:GLY412 4.5 30.3 1.0
N A:ASN395 4.5 28.1 1.0
N A:ARG392 4.6 21.1 1.0
CA A:GLY412 4.6 31.2 1.0
CA A:CA620 4.6 25.4 1.0
CB A:ASN414 4.6 30.2 1.0
CA A:GLY391 4.7 19.4 1.0
CA A:ASN395 4.7 29.3 1.0
CA A:ARG392 4.8 21.1 1.0
CA A:ASP396 4.9 27.8 1.0
C A:ASN395 4.9 29.8 1.0
C A:GLY412 4.9 31.9 1.0

Calcium binding site 6 out of 10 in 2zj7

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Calcium binding site 6 out of 10 in the Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca623

b:27.3
occ:1.00
O A:GLY511 2.2 25.3 1.0
O A:GLY496 2.3 27.2 1.0
O A:ASP513 2.4 25.4 1.0
O A:THR494 2.4 28.9 1.0
OD2 A:ASP498 2.5 32.9 1.0
OD1 A:ASP516 2.5 27.9 1.0
OD2 A:ASP516 2.9 26.8 1.0
CG A:ASP516 3.1 23.7 1.0
CG A:ASP498 3.4 29.2 1.0
C A:GLY511 3.4 25.0 1.0
C A:GLY496 3.5 27.3 1.0
C A:THR494 3.5 30.3 1.0
C A:ASP513 3.6 24.9 1.0
C A:LEU512 3.9 25.7 1.0
N A:THR494 4.0 29.8 1.0
N A:ASP513 4.0 24.6 1.0
O A:LEU512 4.1 25.7 1.0
N A:GLY496 4.1 29.1 1.0
OD1 A:ASP498 4.1 30.0 1.0
N A:ASP498 4.1 26.8 1.0
CA A:GLY511 4.2 23.8 1.0
C A:ASN495 4.3 29.5 1.0
CB A:ASP498 4.3 27.0 1.0
CA A:ASN495 4.3 30.3 1.0
N A:LEU512 4.3 24.5 1.0
N A:ASN495 4.4 30.6 1.0
CA A:GLY514 4.4 22.9 1.0
N A:ALA497 4.4 26.0 1.0
CA A:THR494 4.4 29.2 1.0
CA A:ASP513 4.4 25.5 1.0
CA A:GLY496 4.4 28.1 1.0
N A:GLY514 4.4 23.8 1.0
OG1 A:THR494 4.5 27.5 1.0
CA A:LEU512 4.5 24.4 1.0
CB A:ASP516 4.5 21.1 1.0
CA A:CA624 4.5 22.6 1.0
CA A:ALA497 4.5 26.3 1.0
O A:GLY514 4.6 22.1 1.0
CB A:LEU512 4.6 23.2 1.0
C A:GLY514 4.6 24.1 1.0
C A:ALA497 4.7 26.8 1.0
CA A:ASP498 4.9 26.6 1.0
O A:ASN495 4.9 27.8 1.0
C A:GLY493 4.9 31.9 1.0
CA A:GLY493 5.0 32.5 1.0

Calcium binding site 7 out of 10 in 2zj7

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Calcium binding site 7 out of 10 in the Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca624

b:22.6
occ:1.00
O A:LEU512 2.3 25.7 1.0
O A:GLY529 2.3 25.7 1.0
OD2 A:ASP516 2.4 26.8 1.0
O A:ALA531 2.4 23.4 1.0
O A:GLY514 2.4 22.1 1.0
OD1 A:ASP534 2.5 24.8 1.0
OD2 A:ASP534 3.0 18.8 1.0
CG A:ASP534 3.1 24.6 1.0
CG A:ASP516 3.4 23.7 1.0
C A:LEU512 3.5 25.7 1.0
C A:GLY529 3.5 26.4 1.0
C A:GLY514 3.6 24.1 1.0
C A:ALA531 3.7 23.7 1.0
C A:ASP513 3.8 24.9 1.0
O A:ASP513 3.8 25.4 1.0
C A:GLY530 4.1 25.5 1.0
C A:GLY511 4.1 25.0 1.0
CB A:ASP516 4.1 21.1 1.0
CA A:ASP513 4.1 25.5 1.0
O A:GLY530 4.2 24.0 1.0
N A:GLY514 4.2 23.8 1.0
N A:ASP513 4.2 24.6 1.0
N A:ASP516 4.2 22.3 1.0
O A:GLY511 4.3 25.3 1.0
OD1 A:ASP516 4.3 27.9 1.0
N A:LEU512 4.3 24.5 1.0
N A:GLY530 4.3 27.3 1.0
CA A:GLY530 4.3 26.0 1.0
CA A:GLY532 4.3 22.1 1.0
N A:ALA531 4.4 25.8 1.0
CA A:GLY514 4.4 22.9 1.0
CA A:GLY529 4.4 25.6 1.0
N A:GLY532 4.5 23.4 1.0
CA A:GLY511 4.5 23.8 1.0
CA A:LEU512 4.5 24.4 1.0
CA A:CA623 4.5 27.3 1.0
CB A:ASP534 4.6 22.4 1.0
C A:GLY532 4.6 22.7 1.0
N A:ASN515 4.7 23.1 1.0
CA A:ALA531 4.7 25.0 1.0
CA A:CA626 4.7 27.3 1.0
O A:GLY532 4.8 23.2 1.0
CA A:ASP516 4.8 21.5 1.0
CA A:ASN515 4.9 23.3 1.0

Calcium binding site 8 out of 10 in 2zj7

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Calcium binding site 8 out of 10 in the Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca625

b:28.4
occ:1.00
OD2 A:ASP525 2.3 22.9 1.0
O A:GLY540 2.3 27.2 1.0
O A:SER538 2.4 25.1 1.0
O A:GLY523 2.4 27.5 1.0
O A:GLY521 2.5 31.3 1.0
OD1 A:ASP543 2.6 22.3 1.0
OD2 A:ASP543 2.6 26.2 1.0
CG A:ASP543 3.0 24.6 1.0
CG A:ASP525 3.4 27.5 1.0
C A:GLY540 3.4 26.9 1.0
C A:SER538 3.6 25.4 1.0
C A:GLY521 3.6 30.9 1.0
C A:GLY523 3.7 28.2 1.0
N A:GLY521 3.9 27.4 1.0
N A:GLY540 4.0 29.1 1.0
OG A:SER538 4.0 23.9 1.0
CB A:ASP525 4.2 27.8 1.0
N A:GLY523 4.2 29.7 1.0
N A:ASP525 4.2 27.6 1.0
CA A:GLY540 4.3 27.0 1.0
C A:GLY539 4.3 28.4 1.0
O A:HOH885 4.3 38.2 1.0
OD1 A:ASP525 4.3 28.7 1.0
N A:GLY541 4.4 26.1 1.0
CA A:GLY521 4.4 29.7 1.0
C A:VAL522 4.4 30.6 1.0
CA A:GLY541 4.4 24.8 1.0
N A:GLY539 4.5 25.9 1.0
C A:GLY520 4.5 27.0 1.0
CB A:ASP543 4.5 24.3 1.0
CA A:SER538 4.5 24.6 1.0
CA A:GLY539 4.5 27.2 1.0
N A:VAL522 4.5 30.3 1.0
CA A:GLY523 4.6 28.8 1.0
CA A:GLY520 4.6 26.2 1.0
N A:ASN524 4.6 28.6 1.0
CA A:VAL522 4.7 29.2 1.0
CE2 A:PHE527 4.8 16.9 1.0
CZ A:PHE527 4.8 17.9 1.0
O A:VAL522 4.8 30.8 1.0
CA A:ASN524 4.8 27.4 1.0
CA A:ASP525 4.8 28.1 1.0
O A:GLY539 4.9 30.6 1.0
CB A:SER538 5.0 24.5 1.0
C A:ASN524 5.0 27.8 1.0
C A:GLY541 5.0 25.5 1.0

Calcium binding site 9 out of 10 in 2zj7

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Calcium binding site 9 out of 10 in the Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 9 of Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca626

b:27.3
occ:1.00
O A:GLY532 2.3 23.2 1.0
O A:PHE551 2.4 19.9 1.0
OD2 A:ASP534 2.4 18.8 1.0
OD1 A:ASP554 2.4 27.6 1.0
O A:GLY530 2.5 24.0 1.0
O A:HOH676 2.5 26.4 1.0
CG A:ASP554 3.3 21.1 1.0
OD2 A:ASP554 3.4 29.1 1.0
CG A:ASP534 3.4 24.6 1.0
C A:GLY532 3.5 22.7 1.0
C A:PHE551 3.5 21.3 1.0
C A:GLY530 3.7 25.5 1.0
O A:ALA531 3.9 23.4 1.0
C A:ALA531 3.9 23.7 1.0
N A:GLY532 4.0 23.4 1.0
C A:GLY529 4.0 26.4 1.0
CB A:ASP534 4.1 22.4 1.0
O A:GLY529 4.1 25.7 1.0
N A:ASP534 4.1 24.0 1.0
N A:GLY530 4.2 27.3 1.0
CA A:PHE551 4.3 21.7 1.0
CA A:GLY532 4.3 22.1 1.0
N A:ASN533 4.4 22.5 1.0
OD1 A:ASP534 4.4 24.8 1.0
CA A:GLY529 4.5 25.6 1.0
CA A:GLY530 4.5 26.0 1.0
CB A:PHE551 4.5 20.4 1.0
CA A:ALA531 4.5 25.0 1.0
N A:GLY552 4.6 21.1 1.0
CA A:ASN533 4.6 23.1 1.0
N A:ALA531 4.6 25.8 1.0
CA A:GLY552 4.6 21.3 1.0
CB A:ASP554 4.7 20.5 1.0
CA A:CA624 4.7 22.6 1.0
CA A:ASP534 4.8 23.8 1.0
O A:HOH887 4.8 23.6 1.0
C A:ASN533 4.8 22.5 1.0
C A:GLY552 5.0 22.0 1.0

Calcium binding site 10 out of 10 in 2zj7

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Calcium binding site 10 out of 10 in the Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 10 of Crystal Structure of D157A Mutant of Pseudomonas Sp. MIS38 Lipase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca627

b:29.2
occ:1.00
OG1 A:THR560 2.2 26.5 1.0
O A:GLY541 2.3 26.6 1.0
OD1 A:ASP563 2.4 24.4 1.0
OD1 A:ASN562 2.5 31.0 1.0
OD2 A:ASP563 2.5 26.2 1.0
CG A:ASP563 2.7 28.4 1.0
O A:HOH897 2.8 25.1 1.0
CG A:ASN562 3.5 30.4 1.0
C A:GLY541 3.5 25.5 1.0
CB A:THR560 3.6 29.7 1.0
ND2 A:ASN562 3.9 28.3 1.0
CG2 A:THR560 4.1 26.8 1.0
O A:HOH947 4.2 30.3 1.0
CB A:ASP563 4.2 28.8 1.0
N A:ASP563 4.2 28.3 1.0
N A:ALA542 4.3 24.4 1.0
CA A:ALA542 4.3 24.9 1.0
N A:THR560 4.3 29.2 1.0
OG A:SER538 4.3 23.9 1.0
N A:GLY541 4.3 26.1 1.0
CA A:THR560 4.4 30.0 1.0
C A:ASN562 4.4 28.5 1.0
N A:ASP543 4.6 25.6 1.0
C A:GLY540 4.6 26.9 1.0
CA A:GLY541 4.6 24.8 1.0
N A:ASN562 4.7 30.1 1.0
CA A:ASP563 4.7 28.8 1.0
CB A:ASN562 4.7 29.1 1.0
C A:THR560 4.7 31.7 1.0
CA A:ASN562 4.8 29.5 1.0
O A:ASN562 4.8 28.7 1.0
O A:GLY540 4.9 27.2 1.0
O A:THR560 4.9 32.7 1.0
O A:GLY558 4.9 25.8 1.0

Reference:

K.Kuwahara, C.Angkawidjaja, H.Matsumura, Y.Koga, K.Takano, S.Kanaya. Importance of the CA2+-Binding Sites in the N-Catalytic Domain of A Family I.3 Lipase For Activity and Stability Protein Eng.Des.Sel. V. 21 737 2008.
ISSN: ISSN 1741-0126
PubMed: 18987131
DOI: 10.1093/PROTEIN/GZN057
Page generated: Sat Dec 12 04:01:40 2020

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