Calcium in PDB 2zl7: Atomic Resolution Structural Characterization of Recognition of Histo-Blood Group Antigens By Norwalk Virus

The structure of Atomic Resolution Structural Characterization of Recognition of Histo-Blood Group Antigens By Norwalk Virus, PDB code: 2zl7 was solved by J.M.Choi, A.M.Huston, M.K.Estes, B.V.V.Prasad, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.07 / 1.35
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	83.069, 83.069, 164.316, 90.00, 90.00, 120.00
R / Rfree (%)	17.1 / 18.8

The structure of Atomic Resolution Structural Characterization of Recognition of Histo-Blood Group Antigens By Norwalk Virus also contains other interesting chemical elements:

Magnesium

(Mg)

2 atoms

The binding sites of Calcium atom in the Atomic Resolution Structural Characterization of Recognition of Histo-Blood Group Antigens By Norwalk Virus (pdb code 2zl7). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Atomic Resolution Structural Characterization of Recognition of Histo-Blood Group Antigens By Norwalk Virus, PDB code: 2zl7:

Calcium binding site 1 out of 1 in the Atomic Resolution Structural Characterization of Recognition of Histo-Blood Group Antigens By Norwalk Virus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Atomic Resolution Structural Characterization of Recognition of Histo-Blood Group Antigens By Norwalk Virus within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1 b:42.5 occ:1.00 O A:HOH862 2.0 20.5 1.0 O A:THR347 2.7 13.7 1.0 O A:PRO349 3.0 17.3 1.0 O A:THR348 3.2 17.0 1.0 O A:ASN394 3.3 15.5 1.0 C A:THR348 3.4 16.1 1.0 O A:PHE352 3.4 11.9 1.0 O A:HOH664 3.5 23.3 1.0 ND2 A:ASN394 3.6 20.6 1.0 CB A:ASN394 3.7 15.2 1.0 C A:THR347 3.7 13.5 1.0 CA A:THR348 3.8 14.8 1.0 CB A:PHE352 3.9 12.1 1.0 CG A:ASN394 3.9 17.9 1.0 O A:GLY396 3.9 20.7 1.0 C A:PRO349 4.0 17.7 1.0 N A:PRO349 4.0 16.4 1.0 CD2 A:PHE352 4.0 11.4 1.0 N A:THR348 4.2 13.9 1.0 C A:ASN394 4.3 13.8 1.0 C A:PHE352 4.4 11.8 1.0 CG A:PHE352 4.4 12.2 1.0 CA A:PHE352 4.6 12.1 1.0 CA A:PRO349 4.6 16.9 1.0 CA A:ASN394 4.6 14.4 1.0 OD1 A:ASN394 4.8 19.4 1.0 N A:PHE352 4.8 13.1 1.0 O A:HOH573 4.8 15.2 1.0 CD A:PRO349 4.9 17.3 1.0 N A:ASP350 4.9 18.2 1.0 O A:HOH652 5.0 19.3 1.0

J.M.Choi, A.M.Hutson, M.K.Estes, B.V.V.Prasad. Atomic Resolution Structural Characterization of Recognition of Histo-Blood Group Antigens By Norwalk Virus Proc.Natl.Acad.Sci.Usa V. 105 9175 2008.
ISSN: ISSN 0027-8424
PubMed: 18599458
DOI: 10.1073/PNAS.0803275105