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Calcium in PDB 333d: The Crystal Structure of An Rna Oligomer Incorporating Tandem Adenosine-Inosine Mismatches

Protein crystallography data

The structure of The Crystal Structure of An Rna Oligomer Incorporating Tandem Adenosine-Inosine Mismatches, PDB code: 333d was solved by R.J.Carter, K.J.Baeyens, J.Santalucia Jr., D.H.Turner, S.R.Holbrook, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 12.00 / 2.52
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 39.050, 39.050, 58.850, 90.00, 90.00, 120.00
R / Rfree (%) 24.6 / 26.6

Calcium Binding Sites:

The binding sites of Calcium atom in the The Crystal Structure of An Rna Oligomer Incorporating Tandem Adenosine-Inosine Mismatches (pdb code 333d). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the The Crystal Structure of An Rna Oligomer Incorporating Tandem Adenosine-Inosine Mismatches, PDB code: 333d:

Calcium binding site 1 out of 1 in 333d

Go back to Calcium Binding Sites List in 333d
Calcium binding site 1 out of 1 in the The Crystal Structure of An Rna Oligomer Incorporating Tandem Adenosine-Inosine Mismatches


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Crystal Structure of An Rna Oligomer Incorporating Tandem Adenosine-Inosine Mismatches within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca9

b:32.1
occ:1.00
O A:HOH13 2.6 24.4 1.0
O A:HOH11 2.6 39.2 1.0
O A:HOH10 2.7 34.8 1.0
O A:HOH12 2.7 11.4 1.0
OP1 A:G6 3.3 13.8 1.0
P A:G6 4.4 13.8 1.0
OP2 A:G6 4.7 13.8 1.0
OP2 A:C7 4.7 16.3 1.0

Reference:

R.J.Carter, K.J.Baeyens, J.Santalucia, D.H.Turner, S.R.Holbrook. The Crystal Structure of An Rna Oligomer Incorporating Tandem Adenosine-Inosine Mismatches. Nucleic Acids Res. V. 25 4117 1997.
ISSN: ISSN 0305-1048
PubMed: 9321667
DOI: 10.1093/NAR/25.20.4117
Page generated: Sat Dec 12 04:02:21 2020

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