Calcium in PDB 3bvc: Crystal Structure of Uncharacterized Protein ISM_01780 From Roseovarius Nubinhibens Ism

The structure of Crystal Structure of Uncharacterized Protein ISM_01780 From Roseovarius Nubinhibens Ism, PDB code: 3bvc was solved by Y.Patskovsky, R.Toro, A.J.Meyer, M.Rutter, M.Iizuka, M.Maletic, D.Smith, S.Wasserman, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Researchcenter For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.75
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	96.405, 101.973, 76.506, 90.00, 90.00, 90.00
R / Rfree (%)	25.5 / 29.8

The structure of Crystal Structure of Uncharacterized Protein ISM_01780 From Roseovarius Nubinhibens Ism also contains other interesting chemical elements:

Nickel

(Ni)

2 atoms

The binding sites of Calcium atom in the Crystal Structure of Uncharacterized Protein ISM_01780 From Roseovarius Nubinhibens Ism (pdb code 3bvc). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Crystal Structure of Uncharacterized Protein ISM_01780 From Roseovarius Nubinhibens Ism, PDB code: 3bvc:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in the Crystal Structure of Uncharacterized Protein ISM_01780 From Roseovarius Nubinhibens Ism


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Uncharacterized Protein ISM_01780 From Roseovarius Nubinhibens Ism within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca301 b:0.2 occ:1.00 OD2 A:ASP27 2.7 0.8 1.0 CG A:ASP27 3.5 89.5 1.0 OD1 A:ASP27 3.5 1.0 1.0 OE1 A:GLU29 3.6 0.6 1.0 CB A:GLU29 4.7 87.8 1.0 CD A:GLU29 4.8 0.9 1.0 CB A:ASP27 4.9 75.0 1.0

Calcium binding site 2 out of 4 in the Crystal Structure of Uncharacterized Protein ISM_01780 From Roseovarius Nubinhibens Ism


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of Uncharacterized Protein ISM_01780 From Roseovarius Nubinhibens Ism within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca302 b:0.4 occ:1.00 OE1 A:GLU195 2.6 89.3 1.0 OE1 A:GLU112 2.7 90.8 1.0 CD A:GLU112 3.4 85.7 1.0 CD A:GLU195 3.6 93.2 1.0 OE2 A:GLU112 3.6 90.6 1.0 OE2 A:GLU195 4.2 88.5 1.0 CG A:GLU195 4.5 91.5 1.0 CG A:GLU112 4.8 82.5 1.0

Calcium binding site 3 out of 4 in the Crystal Structure of Uncharacterized Protein ISM_01780 From Roseovarius Nubinhibens Ism


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Crystal Structure of Uncharacterized Protein ISM_01780 From Roseovarius Nubinhibens Ism within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca306 b:0.4 occ:1.00 OE1 A:GLU32 3.2 86.3 1.0 OE2 A:GLU32 3.2 78.2 1.0 CD A:GLU32 3.6 75.8 1.0 OG A:SER133 4.9 88.8 1.0

Calcium binding site 4 out of 4 in the Crystal Structure of Uncharacterized Protein ISM_01780 From Roseovarius Nubinhibens Ism


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Crystal Structure of Uncharacterized Protein ISM_01780 From Roseovarius Nubinhibens Ism within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca303 b:0.3 occ:1.00 OD2 B:ASP94 2.9 74.8 1.0 OD1 B:ASP94 3.2 72.5 1.0 CG B:ASP94 3.5 77.7 1.0 OD1 B:ASP96 4.5 0.2 1.0 CG B:ASP96 4.6 94.3 1.0 OD2 B:ASP96 4.7 0.0 1.0 CA B:ASP96 4.8 86.3 1.0 N B:ASP96 5.0 79.4 1.0 CB B:ASP94 5.0 66.8 1.0

Y.Patskovsky, R.Toro, A.J.Meyer, M.Rutter, M.Iizuka, M.Maletic, D.Smith, S.Wasserman, J.M.Sauder, S.K.Burley, S.C.Almo. Crystal Structure of An Uncharacterized Protein ISM_01780 From Roseovarius Nubinhibens. To Be Published.