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Calcium in PDB 3cni: Crystal Structure of A Domain of A Putative Abc Type-2 Transporter From Thermotoga Maritima MSB8

Protein crystallography data

The structure of Crystal Structure of A Domain of A Putative Abc Type-2 Transporter From Thermotoga Maritima MSB8, PDB code: 3cni was solved by E.V.Filippova, I.Shumilin, K.L.Tkaczuk, M.Cymborowski, M.Chruszcz, X.Xu, Q.Que, A.Savchenko, A.M.Edwards, A.Joachimiak, W.Minor, Midwest Centerfor Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 56.80 / 2.30
Space group P 64 2 2
Cell size a, b, c (Å), α, β, γ (°) 65.598, 65.598, 141.192, 90.00, 90.00, 120.00
R / Rfree (%) 20.4 / 22.7

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of A Domain of A Putative Abc Type-2 Transporter From Thermotoga Maritima MSB8 (pdb code 3cni). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of A Domain of A Putative Abc Type-2 Transporter From Thermotoga Maritima MSB8, PDB code: 3cni:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 3cni

Go back to Calcium Binding Sites List in 3cni
Calcium binding site 1 out of 2 in the Crystal Structure of A Domain of A Putative Abc Type-2 Transporter From Thermotoga Maritima MSB8


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Domain of A Putative Abc Type-2 Transporter From Thermotoga Maritima MSB8 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca201

b:62.6
occ:1.00
O A:HOH321 2.3 46.8 1.0
O A:HOH320 2.4 60.0 1.0
O A:HOH322 2.4 57.9 1.0
OE2 A:GLU182 2.5 69.3 1.0
O A:HOH319 2.5 43.8 1.0
OG A:SER135 2.6 63.8 1.0
CD A:GLU182 3.4 67.9 1.0
CB A:SER135 3.5 62.7 1.0
OE1 A:GLU182 3.7 69.8 1.0
CG2 A:THR131 4.4 70.4 1.0
O A:THR131 4.5 67.7 1.0
NE2 A:GLN167 4.7 60.0 1.0
CA A:SER135 4.7 63.9 1.0
O A:HOH336 4.8 63.3 1.0
CG A:GLU182 4.8 66.6 1.0
OE1 A:GLN167 4.8 62.1 1.0
O A:HOH327 4.9 58.4 1.0

Calcium binding site 2 out of 2 in 3cni

Go back to Calcium Binding Sites List in 3cni
Calcium binding site 2 out of 2 in the Crystal Structure of A Domain of A Putative Abc Type-2 Transporter From Thermotoga Maritima MSB8


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of A Domain of A Putative Abc Type-2 Transporter From Thermotoga Maritima MSB8 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca202

b:92.8
occ:0.50
O A:HOH325 2.5 41.1 0.5
OE2 A:GLU61 2.6 61.1 1.0
OE1 A:GLU61 3.1 62.1 1.0
CD A:GLU61 3.2 59.1 1.0
CG A:GLU61 4.7 57.8 1.0
O A:THR56 4.8 57.1 1.0
OG1 A:THR58 4.9 51.0 1.0

Reference:

E.V.Filippova, K.L.Tkaczuk, M.Chruszcz, X.Xu, A.Savchenko, A.Edwards, W.Minor. Structural Characterization of the Putative Abc-Type 2 Transporter From Thermotoga Maritima MSB8. J.Struct.Funct.Genom. V. 15 215 2014.
ISSN: ISSN 1345-711X
PubMed: 25306867
DOI: 10.1007/S10969-014-9189-7
Page generated: Sat Jul 13 08:43:11 2024

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