Atomistry » Calcium » PDB 3cga-3ctz » 3coa
Atomistry »
  Calcium »
    PDB 3cga-3ctz »
      3coa »

Calcium in PDB 3coa: Crystal Structure of FOXO1 Dbd Bound to Ire Dna

Protein crystallography data

The structure of Crystal Structure of FOXO1 Dbd Bound to Ire Dna, PDB code: 3coa was solved by M.M.Brent, R.Anand, R.Marmorstein, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.20
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 76.062, 102.432, 65.446, 90.00, 90.00, 90.00
R / Rfree (%) 21.6 / 25

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of FOXO1 Dbd Bound to Ire Dna (pdb code 3coa). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of FOXO1 Dbd Bound to Ire Dna, PDB code: 3coa:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 3coa

Go back to Calcium Binding Sites List in 3coa
Calcium binding site 1 out of 2 in the Crystal Structure of FOXO1 Dbd Bound to Ire Dna


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of FOXO1 Dbd Bound to Ire Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca1

b:50.8
occ:1.00
O C:LEU217 2.8 14.7 1.0
O C:PHE223 2.9 19.9 1.0
O C:HIS220 2.9 23.7 1.0
O C:SER218 3.1 20.6 1.0
O C:HOH275 3.1 23.0 1.0
O A:HOH14 3.2 38.2 1.0
C C:SER218 3.7 19.4 1.0
C C:HIS220 3.8 24.9 1.0
C C:PHE223 3.9 20.6 1.0
C C:LEU217 3.9 16.2 1.0
CA C:SER218 3.9 20.0 1.0
O C:HOH278 4.1 28.2 1.0
CB C:PHE223 4.4 17.4 1.0
N C:HIS220 4.4 23.6 1.0
CZ3 C:TRP237 4.4 10.5 1.0
N C:SER218 4.4 16.4 1.0
N C:SER221 4.5 24.6 1.0
CA C:SER221 4.5 25.1 1.0
CA C:PHE223 4.6 20.2 1.0
N C:LEU219 4.6 20.8 1.0
C C:LEU219 4.7 23.7 1.0
N C:PHE223 4.7 21.2 1.0
CA C:HIS220 4.7 24.1 1.0
O C:HOH308 4.7 41.4 1.0
N C:ILE224 4.8 19.2 1.0
CA C:ILE224 4.9 21.4 1.0

Calcium binding site 2 out of 2 in 3coa

Go back to Calcium Binding Sites List in 3coa
Calcium binding site 2 out of 2 in the Crystal Structure of FOXO1 Dbd Bound to Ire Dna


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of FOXO1 Dbd Bound to Ire Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Ca2

b:55.5
occ:1.00
O F:PHE223 2.8 17.0 1.0
O F:LEU217 2.9 18.0 1.0
O F:HIS220 3.1 20.9 1.0
O D:HOH13 3.1 18.8 1.0
O F:HOH267 3.2 39.0 1.0
O F:SER218 3.2 19.4 1.0
C F:SER218 3.8 18.6 1.0
C F:HIS220 3.8 21.7 1.0
C F:PHE223 3.9 19.3 1.0
O F:HOH317 4.0 40.3 1.0
C F:LEU217 4.0 17.6 1.0
CA F:SER218 4.1 19.4 1.0
O F:HOH296 4.3 36.5 1.0
CA F:SER221 4.4 23.2 1.0
N F:SER221 4.5 21.5 1.0
N F:HIS220 4.5 21.1 1.0
CB F:PHE223 4.5 15.3 1.0
N F:SER218 4.5 17.0 1.0
CZ3 F:TRP237 4.5 12.6 1.0
CA F:PHE223 4.7 18.4 1.0
C F:LEU219 4.7 21.0 1.0
N F:LEU219 4.7 20.4 1.0
N F:PHE223 4.7 19.4 1.0
CA F:HIS220 4.7 22.5 1.0
N F:ILE224 4.8 18.8 1.0
CA F:ILE224 4.8 20.9 1.0
C F:SER221 4.9 23.3 1.0
O F:LEU219 5.0 22.1 1.0

Reference:

M.M.Brent, R.Anand, R.Marmorstein. Structural Basis For Dna Recognition By FOXO1 and Its Regulation By Posttranslational Modification. Structure V. 16 1407 2008.
ISSN: ISSN 0969-2126
PubMed: 18786403
DOI: 10.1016/J.STR.2008.06.013
Page generated: Sat Jul 13 08:43:32 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy