Calcium in PDB 3ctn: Structure of Calcium-Saturated Cardiac Troponin C, uc(Nmr), 30 Structures
Calcium Binding Sites:
The binding sites of Calcium atom in the Structure of Calcium-Saturated Cardiac Troponin C, uc(Nmr), 30 Structures
(pdb code 3ctn). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
Structure of Calcium-Saturated Cardiac Troponin C, uc(Nmr), 30 Structures, PDB code: 3ctn:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 3ctn
Go back to
Calcium Binding Sites List in 3ctn
Calcium binding site 1 out
of 2 in the Structure of Calcium-Saturated Cardiac Troponin C, uc(Nmr), 30 Structures
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Structure of Calcium-Saturated Cardiac Troponin C, uc(Nmr), 30 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca1
b:0.5
occ:1.00
|
HB3
|
A:ASN107
|
1.9
|
1.1
|
1.0
|
OD1
|
A:ASP109
|
2.1
|
0.8
|
1.0
|
O
|
A:TYR111
|
2.3
|
0.5
|
1.0
|
OE1
|
A:GLU116
|
2.4
|
1.4
|
1.0
|
HA
|
A:ILE112
|
2.4
|
0.3
|
1.0
|
OE2
|
A:GLU116
|
2.8
|
1.3
|
1.0
|
OD1
|
A:ASP105
|
2.8
|
0.5
|
1.0
|
OD1
|
A:ASN107
|
2.8
|
1.5
|
1.0
|
CB
|
A:ASN107
|
2.8
|
0.6
|
1.0
|
CD
|
A:GLU116
|
2.9
|
0.8
|
1.0
|
CG
|
A:ASN107
|
3.2
|
1.1
|
1.0
|
CG
|
A:ASP109
|
3.3
|
0.7
|
1.0
|
C
|
A:TYR111
|
3.4
|
0.4
|
1.0
|
H
|
A:ASN107
|
3.4
|
0.5
|
1.0
|
HB2
|
A:ASN107
|
3.4
|
1.2
|
1.0
|
CA
|
A:ILE112
|
3.4
|
0.3
|
1.0
|
H
|
A:ASP109
|
3.5
|
0.6
|
1.0
|
H
|
A:ALA108
|
3.6
|
0.6
|
1.0
|
HG12
|
A:ILE112
|
3.8
|
0.4
|
1.0
|
N
|
A:ILE112
|
3.9
|
0.4
|
1.0
|
HG21
|
A:ILE112
|
3.9
|
1.0
|
1.0
|
CA
|
A:ASN107
|
3.9
|
0.6
|
1.0
|
CG
|
A:ASP105
|
3.9
|
0.5
|
1.0
|
N
|
A:ASN107
|
4.0
|
0.5
|
1.0
|
N
|
A:ALA108
|
4.0
|
0.6
|
1.0
|
OD2
|
A:ASP109
|
4.1
|
1.2
|
1.0
|
HB3
|
A:ASP109
|
4.1
|
0.8
|
1.0
|
OD2
|
A:ASP113
|
4.1
|
1.6
|
1.0
|
H
|
A:TYR111
|
4.1
|
0.5
|
1.0
|
H
|
A:ASP113
|
4.1
|
0.4
|
1.0
|
N
|
A:ASP109
|
4.2
|
0.6
|
1.0
|
C
|
A:ASN107
|
4.2
|
0.6
|
1.0
|
CB
|
A:ASP109
|
4.3
|
0.6
|
1.0
|
C
|
A:ILE112
|
4.3
|
0.3
|
1.0
|
OD2
|
A:ASP105
|
4.3
|
0.5
|
1.0
|
CG
|
A:GLU116
|
4.4
|
0.9
|
1.0
|
CB
|
A:ILE112
|
4.4
|
0.3
|
1.0
|
ND2
|
A:ASN107
|
4.5
|
1.7
|
1.0
|
N
|
A:ASP113
|
4.5
|
0.4
|
1.0
|
HA
|
A:ASP105
|
4.5
|
0.5
|
1.0
|
CG
|
A:ASP113
|
4.5
|
0.9
|
1.0
|
CG1
|
A:ILE112
|
4.6
|
0.4
|
1.0
|
CA
|
A:TYR111
|
4.6
|
0.5
|
1.0
|
CG2
|
A:ILE112
|
4.6
|
0.3
|
1.0
|
HB2
|
A:GLU116
|
4.6
|
0.8
|
1.0
|
OD1
|
A:ASP113
|
4.7
|
1.5
|
1.0
|
N
|
A:TYR111
|
4.7
|
0.5
|
1.0
|
HG2
|
A:GLU116
|
4.7
|
1.3
|
1.0
|
HD11
|
A:ILE112
|
4.7
|
1.1
|
1.0
|
HB2
|
A:TYR111
|
4.8
|
0.5
|
1.0
|
H
|
A:ILE112
|
4.8
|
0.4
|
1.0
|
HA
|
A:ASN107
|
4.8
|
0.7
|
1.0
|
CA
|
A:ASP109
|
4.9
|
0.6
|
1.0
|
CB
|
A:GLU116
|
5.0
|
0.4
|
1.0
|
CA
|
A:ALA108
|
5.0
|
0.6
|
1.0
|
C
|
A:ALA108
|
5.0
|
0.6
|
1.0
|
|
Calcium binding site 2 out
of 2 in 3ctn
Go back to
Calcium Binding Sites List in 3ctn
Calcium binding site 2 out
of 2 in the Structure of Calcium-Saturated Cardiac Troponin C, uc(Nmr), 30 Structures
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Structure of Calcium-Saturated Cardiac Troponin C, uc(Nmr), 30 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca2
b:0.7
occ:1.00
|
HB2
|
A:ASP145
|
2.0
|
1.2
|
1.0
|
OE1
|
A:GLU152
|
2.3
|
1.4
|
1.0
|
OD1
|
A:ASN143
|
2.5
|
1.0
|
1.0
|
CD
|
A:GLU152
|
2.7
|
0.8
|
1.0
|
OD1
|
A:ASP141
|
2.8
|
0.9
|
1.0
|
OE2
|
A:GLU152
|
2.8
|
1.2
|
1.0
|
O
|
A:ARG147
|
2.8
|
0.6
|
1.0
|
OD2
|
A:ASP145
|
2.8
|
1.7
|
1.0
|
CB
|
A:ASP145
|
2.9
|
0.8
|
1.0
|
H
|
A:ASP145
|
3.0
|
0.7
|
1.0
|
CG
|
A:ASP145
|
3.1
|
1.1
|
1.0
|
HD22
|
A:ASN143
|
3.2
|
1.7
|
1.0
|
CG
|
A:ASN143
|
3.4
|
1.1
|
1.0
|
H
|
A:ARG147
|
3.6
|
0.6
|
1.0
|
HB3
|
A:ASP145
|
3.6
|
1.0
|
1.0
|
HG3
|
A:ARG147
|
3.6
|
1.3
|
1.0
|
N
|
A:ASP145
|
3.6
|
0.8
|
1.0
|
CG
|
A:ASP141
|
3.7
|
0.8
|
1.0
|
ND2
|
A:ASN143
|
3.7
|
1.5
|
1.0
|
OD2
|
A:ASP141
|
3.8
|
0.8
|
1.0
|
CA
|
A:ASP145
|
3.9
|
0.8
|
1.0
|
CG
|
A:GLU152
|
4.0
|
0.8
|
1.0
|
HG2
|
A:GLU152
|
4.0
|
1.1
|
1.0
|
C
|
A:ARG147
|
4.0
|
0.4
|
1.0
|
HA
|
A:ILE148
|
4.1
|
0.4
|
1.0
|
H
|
A:GLY146
|
4.1
|
0.7
|
1.0
|
H
|
A:ASN143
|
4.2
|
0.8
|
1.0
|
OD1
|
A:ASP145
|
4.2
|
1.9
|
1.0
|
HH11
|
A:ARG147
|
4.3
|
2.5
|
1.0
|
N
|
A:ARG147
|
4.4
|
0.5
|
1.0
|
N
|
A:GLY146
|
4.5
|
0.7
|
1.0
|
C
|
A:ASP145
|
4.5
|
0.7
|
1.0
|
H
|
A:ASP149
|
4.6
|
0.5
|
1.0
|
HD21
|
A:ASN143
|
4.6
|
1.7
|
1.0
|
CG
|
A:ARG147
|
4.7
|
0.8
|
1.0
|
HG3
|
A:GLU152
|
4.7
|
1.0
|
1.0
|
C
|
A:ASN144
|
4.7
|
0.8
|
1.0
|
N
|
A:ASN144
|
4.8
|
0.8
|
1.0
|
H
|
A:ASN144
|
4.8
|
0.9
|
1.0
|
HA
|
A:ASP145
|
4.8
|
0.9
|
1.0
|
CB
|
A:ASN143
|
4.8
|
1.1
|
1.0
|
CA
|
A:ARG147
|
4.8
|
0.5
|
1.0
|
HB3
|
A:GLU152
|
4.8
|
0.8
|
1.0
|
HB2
|
A:GLU152
|
4.8
|
0.8
|
1.0
|
CB
|
A:GLU152
|
4.8
|
0.6
|
1.0
|
N
|
A:ILE148
|
4.9
|
0.3
|
1.0
|
OD1
|
A:ASP149
|
4.9
|
2.2
|
1.0
|
CA
|
A:ILE148
|
4.9
|
0.4
|
1.0
|
HG2
|
A:ARG147
|
4.9
|
1.3
|
1.0
|
C
|
A:ASN143
|
4.9
|
1.1
|
1.0
|
N
|
A:ASN143
|
4.9
|
0.8
|
1.0
|
HA
|
A:ASP141
|
5.0
|
0.7
|
1.0
|
NH1
|
A:ARG147
|
5.0
|
2.2
|
1.0
|
|
Reference:
S.K.Sia,
M.X.Li,
L.Spyracopoulos,
S.M.Gagne,
W.Liu,
J.A.Putkey,
B.D.Sykes.
Structure of Cardiac Muscle Troponin C Unexpectedly Reveals A Closed Regulatory Domain. J.Biol.Chem. V. 272 18216 1997.
ISSN: ISSN 0021-9258
PubMed: 9218458
DOI: 10.1074/JBC.272.29.18216
Page generated: Sat Jul 13 08:46:13 2024
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