Calcium in PDB 3e78: Structure Determination of the Cancer-Associated Mycoplasma Hyorhinis Protein Mh-P37

The structure of Structure Determination of the Cancer-Associated Mycoplasma Hyorhinis Protein Mh-P37, PDB code: 3e78 was solved by K.H.Sippel, A.H.Robbins, R.Reutzel, J.Domsic, R.Mckenna, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	25.00 / 1.90
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	50.445, 68.761, 60.024, 90.00, 108.04, 90.00
R / Rfree (%)	18.6 / 24

The structure of Structure Determination of the Cancer-Associated Mycoplasma Hyorhinis Protein Mh-P37 also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Calcium atom in the Structure Determination of the Cancer-Associated Mycoplasma Hyorhinis Protein Mh-P37 (pdb code 3e78). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure Determination of the Cancer-Associated Mycoplasma Hyorhinis Protein Mh-P37, PDB code: 3e78:

Calcium binding site 1 out of 1 in the Structure Determination of the Cancer-Associated Mycoplasma Hyorhinis Protein Mh-P37


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure Determination of the Cancer-Associated Mycoplasma Hyorhinis Protein Mh-P37 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca601 b:35.9 occ:1.00 O A:PRO118 2.3 25.8 1.0 OD1 A:ASP121 2.3 19.4 1.0 OD2 A:ASP43 2.3 22.0 1.0 O A:SER45 2.4 23.2 1.0 O A:HOH1077 2.7 32.1 1.0 OD2 A:ASP121 2.7 23.0 1.0 CG A:ASP121 2.8 19.5 1.0 O A:HOH1010 3.0 36.9 1.0 CG A:ASP43 3.1 23.5 1.0 C A:PRO118 3.3 27.6 1.0 OD1 A:ASP43 3.5 25.5 1.0 C A:SER45 3.6 21.1 1.0 CA A:PRO118 3.7 26.6 1.0 CB A:PRO118 3.9 34.1 1.0 CA A:ILE46 4.1 22.8 1.0 NH2 A:ARG349 4.2 21.9 1.0 OG A:SER45 4.2 38.7 1.0 N A:THR47 4.2 19.7 1.0 N A:ILE46 4.3 22.2 1.0 CB A:ASP121 4.3 14.7 1.0 CB A:ASP43 4.4 21.0 1.0 N A:GLU119 4.5 25.1 1.0 C A:ILE46 4.6 22.8 1.0 CD1 A:ILE46 4.6 17.3 1.0 CA A:SER45 4.7 22.1 1.0 OG1 A:THR47 4.7 26.8 1.0 CB A:SER45 4.7 29.3 1.0 NE A:ARG349 4.8 19.7 1.0 CZ A:ARG349 4.9 25.9 1.0 CA A:GLU119 5.0 30.2 1.0

K.H.Sippel, A.H.Robbins, R.Reutzel, J.Domsic, S.K.Boehlein, L.Govindasamy, M.Agbandje-Mckenna, C.J.Rosser, R.Mckenna. Structure Determination of the Cancer-Associated Mycoplasma Hyorhinis Protein Mh-P37. Acta Crystallogr.,Sect.D V. 64 1172 2008.
ISSN: ISSN 0907-4449
PubMed: 19020356
DOI: 10.1107/S0907444908030175