Atomistry » Calcium » PDB 3ecj-3eqd » 3ect
Atomistry »
  Calcium »
    PDB 3ecj-3eqd »
      3ect »

Calcium in PDB 3ect: Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae

Protein crystallography data

The structure of Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae, PDB code: 3ect was solved by Y.Kim, N.Maltseva, K.Kwon, L.Papazisi, J.Hasseman, S.Peterson, W.F.Anderson, A.Joachimiak, Center For Structural Genomics Ofinfectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.26 / 2.51
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 73.319, 73.319, 178.515, 90.00, 90.00, 120.00
R / Rfree (%) 19.3 / 25.1

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae (pdb code 3ect). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae, PDB code: 3ect:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 3ect

Go back to Calcium Binding Sites List in 3ect
Calcium binding site 1 out of 2 in the Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca193

b:42.6
occ:0.50
O A:GLY147 2.2 26.2 1.0
O A:HOH240 2.4 25.3 1.0
OD2 A:ASP165 2.5 29.2 1.0
OD1 A:ASP165 2.8 31.1 1.0
CG A:ASP165 3.0 32.2 1.0
C A:GLY147 3.4 27.6 1.0
O A:HOH241 4.2 32.0 1.0
CA A:GLY147 4.3 27.4 1.0
N A:VAL148 4.3 27.7 1.0
CA A:VAL148 4.4 28.3 1.0
N A:THR149 4.4 27.6 1.0
CB A:ASP165 4.5 31.8 1.0
C A:VAL148 4.7 28.4 1.0
O A:HOH210 4.8 6.0 0.5
OG1 A:THR149 4.8 33.2 1.0

Calcium binding site 2 out of 2 in 3ect

Go back to Calcium Binding Sites List in 3ect
Calcium binding site 2 out of 2 in the Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of the Hexapeptide-Repeat Containing- Acetyltransferase VCA0836 From Vibrio Cholerae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca194

b:89.3
occ:0.33
O A:HOH262 2.3 39.5 1.0
O A:HOH206 2.4 73.9 0.3
OD1 A:ASN141 3.0 42.9 1.0
OD1 A:ASN159 3.5 52.4 1.0
O A:HOH260 3.8 46.4 0.3
CG A:ASN141 3.8 38.6 1.0
ND2 A:ASN141 4.1 41.7 1.0
CG A:ASN159 4.5 48.0 1.0
O A:HOH226 4.5 0.8 1.0
O A:ASN141 4.5 36.1 1.0
ND2 A:ASN159 4.9 50.2 1.0

Reference:

Y.Kim, N.Maltseva, K.Kwon, L.Papazisi, J.Hasseman, S.Peterson, W.F.Anderson, A.Joachimiak. Crystal Structure of the Hexapeptide-Repeat Containing-Acetyltransferase VCA0836 From Vibrio Cholerae To Be Published.
Page generated: Sat Jul 13 09:22:17 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy