Calcium in PDB 3ehh: Crystal Structure of Deskc-H188V in Complex with Adp

All present enzymatic activity of Crystal Structure of Deskc-H188V in Complex with Adp:
2.7.13.3;

The structure of Crystal Structure of Deskc-H188V in Complex with Adp, PDB code: 3ehh was solved by D.Albanesi, P.M.Alzari, A.Buschiazzo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.10
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	34.743, 124.050, 138.303, 90.00, 90.00, 90.00
R / Rfree (%)	19.3 / 23.2

The binding sites of Calcium atom in the Crystal Structure of Deskc-H188V in Complex with Adp (pdb code 3ehh). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of Deskc-H188V in Complex with Adp, PDB code: 3ehh:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Crystal Structure of Deskc-H188V in Complex with Adp


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Deskc-H188V in Complex with Adp within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1 b:37.5 occ:1.00 O2A A:ADP2500 2.2 37.5 1.0 OE2 A:GLU289 2.3 46.8 1.0 OD1 A:ASN293 2.3 43.2 1.0 O A:HOH64 2.3 29.1 1.0 O A:HOH14 2.3 11.8 1.0 O3B A:ADP2500 2.4 41.6 1.0 CG A:ASN293 3.3 33.7 1.0 CD A:GLU289 3.5 38.2 1.0 PA A:ADP2500 3.5 50.3 1.0 PB A:ADP2500 3.5 47.3 1.0 ND2 A:ASN293 3.7 27.6 1.0 O3A A:ADP2500 3.7 51.6 1.0 O2B A:ADP2500 3.9 48.0 1.0 OE1 A:GLU289 4.1 40.6 1.0 NE2 A:HIS297 4.2 47.7 1.0 CA A:GLY336 4.3 40.8 1.0 O5' A:ADP2500 4.4 44.1 1.0 N A:GLY336 4.5 44.3 1.0 O1A A:ADP2500 4.6 51.0 1.0 CG A:GLU289 4.6 32.7 1.0 CB A:ASN293 4.7 31.9 1.0 CD2 A:HIS297 4.7 46.2 1.0 O1B A:ADP2500 4.8 52.5 1.0 CA A:ASN293 4.9 33.5 1.0

Calcium binding site 2 out of 2 in the Crystal Structure of Deskc-H188V in Complex with Adp


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of Deskc-H188V in Complex with Adp within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca2 b:38.7 occ:1.00 O2A B:ADP3500 2.2 27.9 1.0 O B:HOH63 2.3 32.5 1.0 OE2 B:GLU289 2.3 45.3 1.0 O3B B:ADP3500 2.3 44.4 1.0 OD1 B:ASN293 2.3 36.9 1.0 O B:HOH43 2.3 19.2 1.0 CG B:ASN293 3.3 36.1 1.0 PB B:ADP3500 3.5 47.5 1.0 CD B:GLU289 3.5 45.1 1.0 PA B:ADP3500 3.6 48.1 1.0 ND2 B:ASN293 3.7 28.2 1.0 O2B B:ADP3500 3.8 40.8 1.0 O3A B:ADP3500 3.8 44.2 1.0 OE1 B:GLU289 4.0 45.9 1.0 CA B:GLY336 4.3 50.0 1.0 NE2 B:HIS297 4.4 53.6 1.0 N B:GLY336 4.5 54.1 1.0 O5' B:ADP3500 4.6 39.8 1.0 CG B:GLU289 4.7 32.5 1.0 O1A B:ADP3500 4.7 41.0 1.0 CB B:ASN293 4.7 29.7 1.0 O1B B:ADP3500 4.8 52.1 1.0 CD2 B:HIS297 4.9 48.6 1.0 CG2 B:THR292 5.0 38.4 1.0 CA B:ASN293 5.0 33.4 1.0

D.Albanesi, M.Martin, F.Trajtenberg, M.C.Mansilla, A.Haouz, P.M.Alzari, D.De Mendoza, A.Buschiazzo. Structural Plasticity and Catalysis Regulation of A Thermosensor Histidine Kinase Proc.Natl.Acad.Sci.Usa V. 106 16185 2009.
ISSN: ISSN 0027-8424
PubMed: 19805278
DOI: 10.1073/PNAS.0906699106