Calcium in PDB 3es3: Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. the Complex with Gold Ions. Ferritin H8-H9X Mutant

Enzymatic activity of Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. the Complex with Gold Ions. Ferritin H8-H9X Mutant

All present enzymatic activity of Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. the Complex with Gold Ions. Ferritin H8-H9X Mutant:
1.16.3.1;

Protein crystallography data

The structure of Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. the Complex with Gold Ions. Ferritin H8-H9X Mutant, PDB code: 3es3 was solved by L.Di Costanzo, D.W.Christianson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	34.94 / 2.80
*Space group*	F 4 3 2
*Cell size a, b, c (Å), α, β, γ (°)*	181.564, 181.564, 181.564, 90.00, 90.00, 90.00
*R / R_free (%)*	22.2 / 27.5

Other elements in 3es3:

The structure of Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. the Complex with Gold Ions. Ferritin H8-H9X Mutant also contains other interesting chemical elements:

Gold

(Au)

4 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. the Complex with Gold Ions. Ferritin H8-H9X Mutant (pdb code 3es3). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. the Complex with Gold Ions. Ferritin H8-H9X Mutant, PDB code: 3es3:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 3es3

Go back to

Calcium Binding Sites List in 3es3

Calcium binding site 1 out of 2 in the Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. the Complex with Gold Ions. Ferritin H8-H9X Mutant

Mono view

Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. the Complex with Gold Ions. Ferritin H8-H9X Mutant within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Ca735 b:34.7 occ:0.33	OE1	A:GLU134	2.2	35.3	1.0
	OD1	A:ASP131	2.3	34.8	1.0
	O	A:HOH764	3.3	30.6	0.5
	CD	A:GLU134	3.4	36.2	1.0
	CG	A:ASP131	3.4	36.6	1.0
	OE2	A:GLU134	4.0	35.5	1.0
	CB	A:ASP131	4.2	35.8	1.0
	OD2	A:ASP131	4.3	36.7	1.0
	CG	A:GLU134	4.6	35.3	1.0
	CB	A:GLU134	4.7	35.6	1.0
	CA	A:ASP131	4.7	34.3	1.0

Calcium binding site 2 out of 2 in 3es3

Go back to

Calcium Binding Sites List in 3es3

Calcium binding site 2 out of 2 in the Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. the Complex with Gold Ions. Ferritin H8-H9X Mutant

Mono view

Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. the Complex with Gold Ions. Ferritin H8-H9X Mutant within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Ca736 b:26.9 occ:0.50	OE1	A:GLN86	3.2	27.9	1.0
	CG	A:LYS87	4.0	25.2	1.0
	CD	A:LYS87	4.4	26.2	1.0
	CD	A:GLN86	4.4	29.2	1.0
	CE	A:LYS87	5.0	27.9	1.0

Reference:

C.A.Butts, J.Swift, S.G.Kang, L.Di Costanzo, D.W.Christianson, J.G.Saven, I.J.Dmochowski. Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. Biochemistry V. 47 12729 2008.
ISSN: ISSN 0006-2960
PubMed: 18991401
DOI: 10.1021/BI8016735

Page generated: Sat Jul 13 09:34:27 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW

	© Copyright 2008-2020 by atomistry.com
Home \| Site Map \| Copyright \| Contact us \| Privacy