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Calcium in PDB 3fd3: Structure of the C-Terminal Domains of A Lysr Family Protein From Agrobacterium Tumefaciens Str. C58.

Protein crystallography data

The structure of Structure of the C-Terminal Domains of A Lysr Family Protein From Agrobacterium Tumefaciens Str. C58., PDB code: 3fd3 was solved by M.E.Cuff, X.Xu, H.Zeng, A.Edwards, A.Savchenko, A.Joachimiak, Midwestcenter For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.16 / 1.70
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 53.613, 53.613, 188.027, 90.00, 90.00, 90.00
R / Rfree (%) 16.9 / 20

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of the C-Terminal Domains of A Lysr Family Protein From Agrobacterium Tumefaciens Str. C58. (pdb code 3fd3). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of the C-Terminal Domains of A Lysr Family Protein From Agrobacterium Tumefaciens Str. C58., PDB code: 3fd3:

Calcium binding site 1 out of 1 in 3fd3

Go back to Calcium Binding Sites List in 3fd3
Calcium binding site 1 out of 1 in the Structure of the C-Terminal Domains of A Lysr Family Protein From Agrobacterium Tumefaciens Str. C58.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of the C-Terminal Domains of A Lysr Family Protein From Agrobacterium Tumefaciens Str. C58. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1

b:36.3
occ:0.70
O A:HOH408 2.3 26.7 1.0
O2 A:EDO322 2.3 33.9 1.0
O A:HOH5 2.4 23.3 1.0
O A:LEU260 2.4 23.8 1.0
C2 A:EDO322 3.2 41.5 1.0
CE2 A:PHE248 3.3 21.0 1.0
CD2 A:PHE248 3.4 21.7 1.0
C A:LEU260 3.6 20.7 1.0
CZ A:PHE248 3.9 20.6 1.0
CG A:PHE248 4.1 20.1 1.0
CE2 A:TYR186 4.3 18.6 1.0
OD2 A:ASP122 4.3 21.1 1.0
CA A:LEU260 4.4 20.9 1.0
OE1 A:GLN223 4.4 22.2 1.0
CD1 A:LEU222 4.5 26.2 1.0
CB A:LEU260 4.5 20.4 1.0
O A:HOH323 4.5 20.6 1.0
CD2 A:TYR186 4.5 19.0 1.0
CE1 A:PHE248 4.5 20.6 1.0
OD1 A:ASP122 4.5 23.6 1.0
N A:ASN261 4.6 20.9 1.0
C1 A:EDO322 4.6 44.8 1.0
N A:LEU260 4.6 20.4 1.0
CD1 A:PHE248 4.6 21.7 1.0
CA A:ASN261 4.7 20.2 1.0
OD2 A:ASP220 4.8 20.5 1.0
CG A:ASP122 4.9 21.1 1.0
CB A:PHE248 4.9 21.1 1.0
OD1 A:ASN261 4.9 20.9 1.0

Reference:

M.E.Cuff, X.Xu, H.Zeng, A.Edwards, A.Savchenko, A.Joachimiak. Structure of the C-Terminal Domains of A Lysr Family Protein From Agrobacterium Tumefaciens Str. C58. To Be Published.
Page generated: Sat Dec 12 04:11:25 2020

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