Calcium in PDB 3g43: Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer
Protein crystallography data
The structure of Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer, PDB code: 3g43
was solved by
J.L.Fallon,
F.A.Quiocho,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
19.93 /
2.10
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
39.790,
113.980,
182.130,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
22 /
26.9
|
Calcium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
14;
Binding sites:
The binding sites of Calcium atom in the Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer
(pdb code 3g43). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 14 binding sites of Calcium where determined in the
Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer, PDB code: 3g43:
Jump to Calcium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Calcium binding site 1 out
of 14 in 3g43
Go back to
Calcium Binding Sites List in 3g43
Calcium binding site 1 out
of 14 in the Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca701
b:40.0
occ:1.00
|
O
|
A:HOH151
|
2.4
|
34.0
|
1.0
|
O
|
A:THR26
|
2.4
|
40.2
|
1.0
|
OD2
|
A:ASP20
|
2.4
|
47.2
|
1.0
|
OD2
|
A:ASP22
|
2.4
|
45.4
|
1.0
|
OE2
|
A:GLU31
|
2.4
|
46.2
|
1.0
|
OE1
|
A:GLU31
|
2.5
|
44.0
|
1.0
|
OD1
|
A:ASP24
|
2.5
|
43.1
|
1.0
|
CD
|
A:GLU31
|
2.8
|
44.7
|
1.0
|
CG
|
A:ASP24
|
3.1
|
43.4
|
1.0
|
OD2
|
A:ASP24
|
3.4
|
43.3
|
1.0
|
CG
|
A:ASP22
|
3.5
|
45.6
|
1.0
|
CG
|
A:ASP20
|
3.5
|
48.1
|
1.0
|
C
|
A:THR26
|
3.6
|
41.8
|
1.0
|
N
|
A:ASP24
|
4.0
|
44.6
|
1.0
|
OG1
|
A:THR26
|
4.0
|
43.0
|
1.0
|
OD1
|
A:ASP22
|
4.0
|
46.7
|
1.0
|
CA
|
A:ASP20
|
4.2
|
48.0
|
1.0
|
N
|
A:ASP22
|
4.2
|
49.6
|
1.0
|
CG
|
A:GLU31
|
4.3
|
43.4
|
1.0
|
N
|
A:THR26
|
4.3
|
43.4
|
1.0
|
OD1
|
A:ASP20
|
4.3
|
50.0
|
1.0
|
C
|
A:ASP20
|
4.3
|
49.2
|
1.0
|
CB
|
A:ASP24
|
4.4
|
44.7
|
1.0
|
N
|
A:GLY23
|
4.4
|
48.3
|
1.0
|
CB
|
A:ASP20
|
4.4
|
48.0
|
1.0
|
N
|
A:LYS21
|
4.4
|
48.9
|
1.0
|
CA
|
A:THR26
|
4.4
|
42.6
|
1.0
|
N
|
A:ILE27
|
4.5
|
40.0
|
1.0
|
CA
|
A:ILE27
|
4.6
|
38.9
|
1.0
|
CA
|
A:ASP24
|
4.6
|
43.8
|
1.0
|
CB
|
A:ASP22
|
4.6
|
47.3
|
1.0
|
CA
|
A:ASP22
|
4.8
|
48.3
|
1.0
|
C
|
A:ASP22
|
4.8
|
48.8
|
1.0
|
O
|
A:ASP20
|
4.9
|
49.1
|
1.0
|
CB
|
A:THR26
|
4.9
|
42.4
|
1.0
|
N
|
A:THR28
|
4.9
|
39.5
|
1.0
|
O
|
A:HOH152
|
4.9
|
47.3
|
1.0
|
N
|
A:GLY25
|
5.0
|
42.8
|
1.0
|
C
|
A:GLY23
|
5.0
|
47.1
|
1.0
|
|
Calcium binding site 2 out
of 14 in 3g43
Go back to
Calcium Binding Sites List in 3g43
Calcium binding site 2 out
of 14 in the Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca702
b:38.0
occ:1.00
|
OD1
|
A:ASN60
|
2.3
|
32.8
|
1.0
|
OD2
|
A:ASP56
|
2.3
|
42.7
|
1.0
|
O
|
A:THR62
|
2.4
|
35.6
|
1.0
|
OE1
|
A:GLU67
|
2.4
|
33.9
|
1.0
|
OE2
|
A:GLU67
|
2.4
|
34.2
|
1.0
|
OD1
|
A:ASP58
|
2.4
|
41.3
|
1.0
|
O
|
A:HOH165
|
2.5
|
40.0
|
1.0
|
CD
|
A:GLU67
|
2.8
|
35.4
|
1.0
|
CG
|
A:ASP58
|
3.2
|
42.2
|
1.0
|
CG
|
A:ASN60
|
3.4
|
34.8
|
1.0
|
CG
|
A:ASP56
|
3.4
|
43.2
|
1.0
|
OD2
|
A:ASP58
|
3.5
|
42.0
|
1.0
|
C
|
A:THR62
|
3.6
|
36.3
|
1.0
|
N
|
A:ASN60
|
4.0
|
36.8
|
1.0
|
O
|
A:HOH205
|
4.1
|
38.7
|
1.0
|
ND2
|
A:ASN60
|
4.1
|
31.5
|
1.0
|
OD1
|
A:ASP56
|
4.2
|
41.5
|
1.0
|
CA
|
A:ASP56
|
4.2
|
42.0
|
1.0
|
N
|
A:THR62
|
4.2
|
35.8
|
1.0
|
CG
|
A:GLU67
|
4.3
|
33.1
|
1.0
|
N
|
A:ASP58
|
4.3
|
40.9
|
1.0
|
CB
|
A:ASN60
|
4.3
|
35.3
|
1.0
|
N
|
A:GLY59
|
4.4
|
41.3
|
1.0
|
CB
|
A:ASP56
|
4.4
|
41.0
|
1.0
|
C
|
A:ASP56
|
4.5
|
42.4
|
1.0
|
N
|
A:ILE63
|
4.5
|
34.4
|
1.0
|
CA
|
A:ILE63
|
4.5
|
37.0
|
1.0
|
CB
|
A:ASP58
|
4.5
|
42.0
|
1.0
|
CA
|
A:THR62
|
4.5
|
34.4
|
1.0
|
N
|
A:ALA57
|
4.6
|
42.4
|
1.0
|
CA
|
A:ASN60
|
4.6
|
36.2
|
1.0
|
N
|
A:GLY61
|
4.7
|
33.5
|
1.0
|
CA
|
A:ASP58
|
4.7
|
41.1
|
1.0
|
C
|
A:ASP58
|
4.7
|
41.1
|
1.0
|
OD1
|
A:ASP64
|
4.8
|
39.1
|
1.0
|
N
|
A:ASP64
|
4.8
|
38.3
|
1.0
|
OG1
|
A:THR62
|
4.8
|
36.3
|
1.0
|
C
|
A:ASN60
|
4.9
|
34.7
|
1.0
|
CG
|
A:ASP64
|
5.0
|
39.4
|
1.0
|
C
|
A:GLY59
|
5.0
|
39.4
|
1.0
|
|
Calcium binding site 3 out
of 14 in 3g43
Go back to
Calcium Binding Sites List in 3g43
Calcium binding site 3 out
of 14 in the Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca703
b:38.2
occ:1.00
|
O
|
B:HOH230
|
2.1
|
29.7
|
1.0
|
OD1
|
B:ASP133
|
2.2
|
41.2
|
1.0
|
OD1
|
B:ASP129
|
2.2
|
38.7
|
1.0
|
O
|
B:GLN135
|
2.3
|
36.4
|
1.0
|
OD1
|
B:ASP131
|
2.5
|
33.6
|
1.0
|
OE1
|
B:GLU140
|
2.5
|
41.5
|
1.0
|
OE2
|
B:GLU140
|
2.5
|
40.0
|
1.0
|
CD
|
B:GLU140
|
2.8
|
40.5
|
1.0
|
CG
|
B:ASP133
|
3.2
|
39.3
|
1.0
|
CG
|
B:ASP131
|
3.3
|
36.8
|
1.0
|
CG
|
B:ASP129
|
3.3
|
44.0
|
1.0
|
C
|
B:GLN135
|
3.5
|
39.5
|
1.0
|
OD2
|
B:ASP131
|
3.6
|
35.9
|
1.0
|
OD2
|
B:ASP133
|
3.8
|
36.3
|
1.0
|
O
|
B:HOH228
|
4.0
|
39.0
|
1.0
|
CA
|
B:ASP129
|
4.0
|
44.1
|
1.0
|
N
|
B:ASP133
|
4.0
|
42.8
|
1.0
|
CB
|
B:ASP129
|
4.0
|
43.6
|
1.0
|
N
|
B:GLN135
|
4.2
|
41.3
|
1.0
|
N
|
B:ASP131
|
4.2
|
43.9
|
1.0
|
CB
|
B:ASP133
|
4.2
|
40.3
|
1.0
|
OD2
|
B:ASP129
|
4.2
|
43.6
|
1.0
|
CG
|
B:GLU140
|
4.3
|
38.7
|
1.0
|
N
|
B:VAL136
|
4.4
|
37.8
|
1.0
|
N
|
B:ILE130
|
4.4
|
44.2
|
1.0
|
CA
|
B:VAL136
|
4.4
|
36.2
|
1.0
|
C
|
B:ASP129
|
4.4
|
43.6
|
1.0
|
CA
|
B:GLN135
|
4.4
|
39.4
|
1.0
|
N
|
B:GLY132
|
4.5
|
44.5
|
1.0
|
N
|
B:ASN137
|
4.6
|
34.6
|
1.0
|
CB
|
B:ASP131
|
4.6
|
39.8
|
1.0
|
CA
|
B:ASP133
|
4.6
|
42.1
|
1.0
|
CA
|
B:ASP131
|
4.7
|
43.5
|
1.0
|
C
|
B:ASP131
|
4.7
|
44.2
|
1.0
|
N
|
B:GLY134
|
4.8
|
42.5
|
1.0
|
C
|
B:ASP133
|
4.9
|
42.2
|
1.0
|
OD1
|
B:ASN137
|
4.9
|
39.9
|
1.0
|
C
|
B:VAL136
|
5.0
|
36.2
|
1.0
|
O
|
B:HOH436
|
5.0
|
46.4
|
1.0
|
|
Calcium binding site 4 out
of 14 in 3g43
Go back to
Calcium Binding Sites List in 3g43
Calcium binding site 4 out
of 14 in the Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca704
b:43.6
occ:1.00
|
O
|
B:TYR99
|
2.2
|
42.5
|
1.0
|
O
|
B:HOH205
|
2.3
|
48.3
|
1.0
|
OD2
|
B:ASP93
|
2.3
|
41.9
|
1.0
|
OD1
|
B:ASP95
|
2.4
|
55.1
|
1.0
|
OE1
|
B:GLU104
|
2.4
|
46.7
|
1.0
|
ND2
|
B:ASN97
|
2.5
|
48.9
|
1.0
|
OE2
|
B:GLU104
|
2.5
|
45.7
|
1.0
|
CD
|
B:GLU104
|
2.8
|
46.1
|
1.0
|
CG
|
B:ASP95
|
3.1
|
56.1
|
1.0
|
OD2
|
B:ASP95
|
3.1
|
56.6
|
1.0
|
C
|
B:TYR99
|
3.4
|
40.9
|
1.0
|
CG
|
B:ASN97
|
3.4
|
49.1
|
1.0
|
CG
|
B:ASP93
|
3.5
|
45.4
|
1.0
|
OD1
|
B:ASN97
|
3.8
|
50.7
|
1.0
|
CA
|
B:ASP93
|
4.1
|
46.1
|
1.0
|
N
|
B:TYR99
|
4.1
|
39.2
|
1.0
|
N
|
B:ASN97
|
4.2
|
47.3
|
1.0
|
CA
|
B:TYR99
|
4.3
|
40.9
|
1.0
|
CG
|
B:GLU104
|
4.3
|
46.5
|
1.0
|
N
|
B:ASP95
|
4.3
|
54.5
|
1.0
|
N
|
B:ILE100
|
4.4
|
40.2
|
1.0
|
N
|
B:LYS94
|
4.4
|
51.0
|
1.0
|
C
|
B:ASP93
|
4.4
|
47.2
|
1.0
|
N
|
B:GLY96
|
4.4
|
51.8
|
1.0
|
OD1
|
B:ASP93
|
4.4
|
43.8
|
1.0
|
CB
|
B:ASP93
|
4.4
|
46.0
|
1.0
|
CA
|
B:ILE100
|
4.5
|
40.4
|
1.0
|
CB
|
B:ASP95
|
4.5
|
55.8
|
1.0
|
O
|
B:HOH320
|
4.5
|
53.1
|
1.0
|
CB
|
B:ASN97
|
4.6
|
47.3
|
1.0
|
O
|
C:HOH409
|
4.6
|
54.5
|
1.0
|
CB
|
B:TYR99
|
4.7
|
41.6
|
1.0
|
N
|
B:SER101
|
4.8
|
41.3
|
1.0
|
CA
|
B:ASN97
|
4.8
|
46.6
|
1.0
|
CA
|
B:ASP95
|
4.8
|
54.2
|
1.0
|
N
|
B:GLY98
|
4.9
|
43.2
|
1.0
|
C
|
B:ASP95
|
5.0
|
53.8
|
1.0
|
|
Calcium binding site 5 out
of 14 in 3g43
Go back to
Calcium Binding Sites List in 3g43
Calcium binding site 5 out
of 14 in the Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 5 of Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca705
b:25.3
occ:1.00
|
OD2
|
B:ASP56
|
2.3
|
27.4
|
1.0
|
O
|
B:HOH169
|
2.3
|
32.0
|
1.0
|
OD1
|
B:ASN60
|
2.4
|
22.2
|
1.0
|
O
|
B:THR62
|
2.4
|
25.2
|
1.0
|
O
|
B:HOH171
|
2.4
|
24.4
|
1.0
|
OD1
|
B:ASP58
|
2.5
|
24.4
|
1.0
|
OE2
|
B:GLU67
|
2.6
|
22.1
|
1.0
|
OE1
|
B:GLU67
|
2.7
|
22.2
|
1.0
|
CD
|
B:GLU67
|
3.0
|
21.3
|
1.0
|
CG
|
B:ASN60
|
3.2
|
25.2
|
1.0
|
CG
|
B:ASP56
|
3.3
|
25.5
|
1.0
|
CG
|
B:ASP58
|
3.4
|
22.6
|
1.0
|
C
|
B:THR62
|
3.6
|
25.3
|
1.0
|
ND2
|
B:ASN60
|
3.7
|
21.8
|
1.0
|
OD2
|
B:ASP58
|
3.8
|
24.3
|
1.0
|
OD1
|
B:ASP56
|
4.1
|
30.6
|
1.0
|
N
|
B:ASN60
|
4.3
|
24.7
|
1.0
|
N
|
B:THR62
|
4.3
|
23.3
|
1.0
|
CB
|
B:ASP56
|
4.3
|
25.9
|
1.0
|
CA
|
B:ASP56
|
4.4
|
24.9
|
1.0
|
CA
|
B:ILE63
|
4.4
|
22.8
|
1.0
|
N
|
B:ASP64
|
4.4
|
21.9
|
1.0
|
N
|
B:ILE63
|
4.4
|
25.0
|
1.0
|
N
|
B:ASP58
|
4.4
|
23.0
|
1.0
|
CB
|
B:ASN60
|
4.4
|
26.2
|
1.0
|
OG1
|
B:THR62
|
4.5
|
22.2
|
1.0
|
CG
|
B:GLU67
|
4.5
|
21.2
|
1.0
|
CA
|
B:THR62
|
4.6
|
24.7
|
1.0
|
OD1
|
B:ASP64
|
4.7
|
28.3
|
1.0
|
CB
|
B:ASP58
|
4.7
|
21.0
|
1.0
|
C
|
B:ASP56
|
4.7
|
26.8
|
1.0
|
N
|
B:GLY59
|
4.7
|
26.5
|
1.0
|
CG
|
B:ASP64
|
4.7
|
24.0
|
1.0
|
O
|
B:HOH168
|
4.7
|
35.6
|
1.0
|
N
|
B:ALA57
|
4.8
|
25.3
|
1.0
|
CA
|
B:ASN60
|
4.8
|
26.8
|
1.0
|
C
|
B:ILE63
|
4.8
|
22.9
|
1.0
|
CA
|
B:ASP58
|
4.9
|
24.0
|
1.0
|
N
|
B:GLY61
|
4.9
|
25.7
|
1.0
|
C
|
B:ASN60
|
5.0
|
26.4
|
1.0
|
|
Calcium binding site 6 out
of 14 in 3g43
Go back to
Calcium Binding Sites List in 3g43
Calcium binding site 6 out
of 14 in the Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 6 of Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca706
b:28.3
occ:1.00
|
OD1
|
B:ASP24
|
2.2
|
26.4
|
1.0
|
OD2
|
B:ASP20
|
2.3
|
24.4
|
1.0
|
O
|
B:THR26
|
2.3
|
31.4
|
1.0
|
O
|
B:HOH398
|
2.3
|
22.7
|
1.0
|
OD2
|
B:ASP22
|
2.5
|
27.1
|
1.0
|
OE1
|
B:GLU31
|
2.5
|
27.1
|
1.0
|
OE2
|
B:GLU31
|
2.6
|
28.6
|
1.0
|
CD
|
B:GLU31
|
2.9
|
27.3
|
1.0
|
CG
|
B:ASP24
|
3.2
|
26.6
|
1.0
|
CG
|
B:ASP22
|
3.4
|
29.9
|
1.0
|
CG
|
B:ASP20
|
3.4
|
26.4
|
1.0
|
C
|
B:THR26
|
3.5
|
28.3
|
1.0
|
OD1
|
B:ASP22
|
3.7
|
26.9
|
1.0
|
OD2
|
B:ASP24
|
3.8
|
30.9
|
1.0
|
OG1
|
B:THR26
|
4.0
|
36.0
|
1.0
|
N
|
B:THR26
|
4.1
|
25.3
|
1.0
|
N
|
B:ASP24
|
4.1
|
28.5
|
1.0
|
CA
|
B:ASP20
|
4.1
|
24.1
|
1.0
|
CB
|
B:ASP24
|
4.2
|
28.3
|
1.0
|
OD1
|
B:ASP20
|
4.2
|
25.7
|
1.0
|
CB
|
B:ASP20
|
4.3
|
24.1
|
1.0
|
CA
|
B:THR26
|
4.3
|
28.3
|
1.0
|
N
|
B:ASP22
|
4.4
|
24.4
|
1.0
|
CG
|
B:GLU31
|
4.4
|
27.4
|
1.0
|
C
|
B:ASP20
|
4.4
|
25.6
|
1.0
|
N
|
B:ILE27
|
4.5
|
23.7
|
1.0
|
CA
|
B:ASP24
|
4.6
|
28.1
|
1.0
|
CA
|
B:ILE27
|
4.6
|
25.5
|
1.0
|
CB
|
B:ASP22
|
4.6
|
21.0
|
1.0
|
N
|
B:LYS21
|
4.6
|
26.0
|
1.0
|
N
|
B:GLY23
|
4.6
|
24.6
|
1.0
|
N
|
B:GLY25
|
4.7
|
28.4
|
1.0
|
CB
|
B:THR26
|
4.8
|
29.6
|
1.0
|
O
|
B:HOH209
|
4.8
|
32.6
|
1.0
|
C
|
B:ASP24
|
4.8
|
29.3
|
1.0
|
CG2
|
B:THR28
|
4.8
|
20.4
|
1.0
|
CA
|
B:ASP22
|
4.8
|
23.8
|
1.0
|
O
|
B:HOH164
|
4.9
|
28.9
|
1.0
|
C
|
B:ASP22
|
4.9
|
24.8
|
1.0
|
N
|
B:THR28
|
4.9
|
23.8
|
1.0
|
O
|
B:ASP20
|
5.0
|
27.5
|
1.0
|
|
Calcium binding site 7 out
of 14 in 3g43
Go back to
Calcium Binding Sites List in 3g43
Calcium binding site 7 out
of 14 in the Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 7 of Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca707
b:38.4
occ:1.00
|
OD1
|
C:ASP129
|
2.2
|
39.4
|
1.0
|
OD2
|
C:ASP133
|
2.3
|
39.4
|
1.0
|
OD2
|
C:ASP131
|
2.3
|
53.8
|
1.0
|
O
|
C:HOH245
|
2.4
|
48.6
|
1.0
|
O
|
C:GLN135
|
2.5
|
36.6
|
1.0
|
OE1
|
C:GLU140
|
2.5
|
45.2
|
1.0
|
OE2
|
C:GLU140
|
2.5
|
44.0
|
1.0
|
CD
|
C:GLU140
|
2.8
|
44.8
|
1.0
|
CG
|
C:ASP133
|
3.1
|
43.1
|
1.0
|
CG
|
C:ASP129
|
3.3
|
38.6
|
1.0
|
CG
|
C:ASP131
|
3.4
|
52.4
|
1.0
|
OD1
|
C:ASP133
|
3.5
|
42.5
|
1.0
|
C
|
C:GLN135
|
3.6
|
37.0
|
1.0
|
OD1
|
C:ASP131
|
3.8
|
53.3
|
1.0
|
N
|
C:ASP133
|
4.1
|
42.3
|
1.0
|
OD2
|
C:ASP129
|
4.1
|
39.2
|
1.0
|
CA
|
C:ASP129
|
4.1
|
37.6
|
1.0
|
CB
|
C:ASP129
|
4.2
|
37.2
|
1.0
|
CG
|
C:GLU140
|
4.3
|
45.1
|
1.0
|
N
|
C:GLN135
|
4.3
|
36.2
|
1.0
|
CB
|
C:ASP133
|
4.3
|
42.5
|
1.0
|
N
|
C:ASP131
|
4.3
|
44.3
|
1.0
|
C
|
C:ASP129
|
4.4
|
38.8
|
1.0
|
ND2
|
C:ASN137
|
4.4
|
49.4
|
1.0
|
CA
|
C:VAL136
|
4.4
|
37.2
|
1.0
|
N
|
C:GLY132
|
4.4
|
45.1
|
1.0
|
N
|
C:VAL136
|
4.4
|
36.3
|
1.0
|
N
|
C:ASN137
|
4.5
|
42.6
|
1.0
|
O
|
C:HOH184
|
4.6
|
44.0
|
1.0
|
CA
|
C:GLN135
|
4.6
|
36.4
|
1.0
|
N
|
C:ILE130
|
4.6
|
40.9
|
1.0
|
CB
|
C:ASP131
|
4.6
|
49.9
|
1.0
|
CA
|
C:ASP133
|
4.7
|
42.1
|
1.0
|
CA
|
C:ASP131
|
4.8
|
46.6
|
1.0
|
N
|
C:GLY134
|
4.8
|
38.3
|
1.0
|
CG
|
C:GLN135
|
4.9
|
38.9
|
1.0
|
C
|
C:ASP131
|
4.9
|
45.9
|
1.0
|
O
|
C:ASP129
|
4.9
|
37.1
|
1.0
|
CG
|
C:ASN137
|
4.9
|
48.5
|
1.0
|
C
|
C:VAL136
|
4.9
|
40.5
|
1.0
|
|
Calcium binding site 8 out
of 14 in 3g43
Go back to
Calcium Binding Sites List in 3g43
Calcium binding site 8 out
of 14 in the Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 8 of Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca708
b:40.9
occ:1.00
|
OD1
|
C:ASN97
|
2.2
|
38.6
|
1.0
|
OD1
|
C:ASP95
|
2.2
|
45.7
|
1.0
|
O
|
C:TYR99
|
2.3
|
40.8
|
1.0
|
OD2
|
C:ASP93
|
2.3
|
42.1
|
1.0
|
OE1
|
C:GLU104
|
2.4
|
37.6
|
1.0
|
O
|
C:HOH176
|
2.5
|
47.6
|
1.0
|
OE2
|
C:GLU104
|
2.6
|
33.9
|
1.0
|
CD
|
C:GLU104
|
2.8
|
36.3
|
1.0
|
CG
|
C:ASN97
|
3.3
|
43.1
|
1.0
|
CG
|
C:ASP95
|
3.3
|
46.0
|
1.0
|
CG
|
C:ASP93
|
3.4
|
41.7
|
1.0
|
C
|
C:TYR99
|
3.5
|
40.9
|
1.0
|
OD2
|
C:ASP95
|
3.9
|
45.7
|
1.0
|
ND2
|
C:ASN97
|
4.0
|
40.5
|
1.0
|
N
|
C:ASN97
|
4.1
|
46.3
|
1.0
|
OD1
|
C:ASP93
|
4.1
|
41.5
|
1.0
|
N
|
C:TYR99
|
4.1
|
42.5
|
1.0
|
CA
|
C:ASP93
|
4.2
|
45.2
|
1.0
|
CB
|
C:ASN97
|
4.3
|
42.3
|
1.0
|
CA
|
C:TYR99
|
4.3
|
41.7
|
1.0
|
N
|
C:ASP95
|
4.3
|
48.3
|
1.0
|
CG
|
C:GLU104
|
4.3
|
33.6
|
1.0
|
CB
|
C:ASP93
|
4.3
|
42.6
|
1.0
|
C
|
C:ASP93
|
4.4
|
47.9
|
1.0
|
N
|
C:ILE100
|
4.5
|
37.5
|
1.0
|
CB
|
C:ASP95
|
4.5
|
47.0
|
1.0
|
N
|
C:GLY96
|
4.5
|
49.1
|
1.0
|
N
|
C:LYS94
|
4.6
|
48.9
|
1.0
|
CA
|
C:ILE100
|
4.6
|
35.6
|
1.0
|
N
|
C:SER101
|
4.6
|
34.6
|
1.0
|
CA
|
C:ASN97
|
4.6
|
43.9
|
1.0
|
CB
|
C:TYR99
|
4.7
|
40.5
|
1.0
|
CA
|
C:ASP95
|
4.8
|
48.8
|
1.0
|
N
|
C:GLY98
|
4.8
|
43.4
|
1.0
|
C
|
C:ASP95
|
4.8
|
48.6
|
1.0
|
O
|
C:ASP93
|
4.9
|
48.1
|
1.0
|
C
|
C:ASN97
|
4.9
|
44.1
|
1.0
|
O
|
C:HOH238
|
5.0
|
48.6
|
1.0
|
|
Calcium binding site 9 out
of 14 in 3g43
Go back to
Calcium Binding Sites List in 3g43
Calcium binding site 9 out
of 14 in the Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 9 of Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca709
b:30.1
occ:1.00
|
OD1
|
C:ASP56
|
2.2
|
33.2
|
1.0
|
O
|
C:HOH443
|
2.4
|
24.7
|
1.0
|
OE2
|
C:GLU67
|
2.4
|
22.8
|
1.0
|
OD1
|
C:ASP58
|
2.4
|
29.2
|
1.0
|
OD1
|
C:ASN60
|
2.5
|
27.6
|
1.0
|
OE1
|
C:GLU67
|
2.5
|
25.3
|
1.0
|
O
|
C:THR62
|
2.5
|
25.8
|
1.0
|
CD
|
C:GLU67
|
2.8
|
27.8
|
1.0
|
CG
|
C:ASP58
|
3.3
|
29.0
|
1.0
|
O
|
C:HOH231
|
3.3
|
43.6
|
1.0
|
CG
|
C:ASN60
|
3.4
|
29.9
|
1.0
|
CG
|
C:ASP56
|
3.5
|
34.4
|
1.0
|
OD2
|
C:ASP58
|
3.6
|
28.1
|
1.0
|
C
|
C:THR62
|
3.7
|
30.2
|
1.0
|
ND2
|
C:ASN60
|
3.9
|
26.7
|
1.0
|
CA
|
C:ASP56
|
4.3
|
31.7
|
1.0
|
CG
|
C:GLU67
|
4.3
|
23.2
|
1.0
|
OD2
|
C:ASP56
|
4.3
|
33.5
|
1.0
|
N
|
C:ASN60
|
4.3
|
32.0
|
1.0
|
CB
|
C:ASP56
|
4.3
|
32.9
|
1.0
|
N
|
C:ASP58
|
4.4
|
28.0
|
1.0
|
CA
|
C:ILE63
|
4.4
|
25.5
|
1.0
|
N
|
C:ASP64
|
4.4
|
23.2
|
1.0
|
N
|
C:THR62
|
4.4
|
33.4
|
1.0
|
OD2
|
C:ASP64
|
4.5
|
28.9
|
1.0
|
N
|
C:ILE63
|
4.5
|
25.0
|
1.0
|
CB
|
C:ASN60
|
4.5
|
29.4
|
1.0
|
C
|
C:ASP56
|
4.6
|
32.0
|
1.0
|
CB
|
C:ASP58
|
4.6
|
29.1
|
1.0
|
OG1
|
C:THR62
|
4.6
|
33.5
|
1.0
|
CA
|
C:THR62
|
4.6
|
31.1
|
1.0
|
N
|
C:GLY59
|
4.7
|
32.1
|
1.0
|
CG
|
C:ASP64
|
4.7
|
27.6
|
1.0
|
N
|
C:ALA57
|
4.8
|
29.9
|
1.0
|
C
|
C:ILE63
|
4.8
|
24.0
|
1.0
|
CA
|
C:ASP58
|
4.8
|
29.2
|
1.0
|
CA
|
C:ASN60
|
4.9
|
31.5
|
1.0
|
O
|
C:HOH172
|
4.9
|
23.1
|
1.0
|
N
|
C:GLY61
|
5.0
|
33.5
|
1.0
|
C
|
C:ASP58
|
5.0
|
31.3
|
1.0
|
|
Calcium binding site 10 out
of 14 in 3g43
Go back to
Calcium Binding Sites List in 3g43
Calcium binding site 10 out
of 14 in the Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer
Mono view
Stereo pair view
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A full contact list of Calcium with other atoms in the Ca binding
site number 10 of Crystal Structure of the Calmodulin-Bound CAV1.2 C-Terminal Regulatory Domain Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca710
b:34.9
occ:1.00
|
OD2
|
C:ASP20
|
2.2
|
33.5
|
1.0
|
O
|
C:HOH157
|
2.2
|
39.4
|
1.0
|
O
|
C:THR26
|
2.3
|
32.9
|
1.0
|
OD1
|
C:ASP24
|
2.4
|
38.1
|
1.0
|
OE1
|
C:GLU31
|
2.5
|
34.6
|
1.0
|
OE2
|
C:GLU31
|
2.5
|
33.5
|
1.0
|
OD2
|
C:ASP22
|
2.5
|
41.1
|
1.0
|
CD
|
C:GLU31
|
2.8
|
34.4
|
1.0
|
CG
|
C:ASP20
|
3.3
|
37.4
|
1.0
|
CG
|
C:ASP24
|
3.3
|
40.4
|
1.0
|
CG
|
C:ASP22
|
3.4
|
43.1
|
1.0
|
C
|
C:THR26
|
3.5
|
36.1
|
1.0
|
OD1
|
C:ASP22
|
3.7
|
41.4
|
1.0
|
OD2
|
C:ASP24
|
3.8
|
40.6
|
1.0
|
CA
|
C:ASP20
|
3.9
|
36.4
|
1.0
|
CB
|
C:ASP20
|
4.0
|
34.6
|
1.0
|
N
|
C:ASP24
|
4.1
|
38.7
|
1.0
|
N
|
C:THR26
|
4.1
|
34.7
|
1.0
|
OD1
|
C:ASP20
|
4.1
|
37.2
|
1.0
|
OG1
|
C:THR26
|
4.1
|
42.3
|
1.0
|
C
|
C:ASP20
|
4.3
|
38.4
|
1.0
|
CG
|
C:GLU31
|
4.3
|
35.5
|
1.0
|
CA
|
C:THR26
|
4.3
|
36.2
|
1.0
|
CB
|
C:ASP24
|
4.4
|
37.5
|
1.0
|
N
|
C:ILE27
|
4.5
|
32.8
|
1.0
|
N
|
C:ASP22
|
4.5
|
41.5
|
1.0
|
N
|
C:LYS21
|
4.5
|
39.6
|
1.0
|
CA
|
C:ILE27
|
4.5
|
30.6
|
1.0
|
N
|
C:GLY23
|
4.5
|
40.7
|
1.0
|
CA
|
C:ASP24
|
4.7
|
39.0
|
1.0
|
O
|
C:HOH158
|
4.7
|
38.9
|
1.0
|
CB
|
C:ASP22
|
4.7
|
40.8
|
1.0
|
N
|
C:GLY25
|
4.8
|
36.6
|
1.0
|
O
|
C:ASP20
|
4.9
|
38.2
|
1.0
|
O
|
C:HOH337
|
4.9
|
43.4
|
1.0
|
CB
|
C:THR26
|
4.9
|
38.5
|
1.0
|
C
|
C:ASP24
|
4.9
|
38.3
|
1.0
|
CA
|
C:ASP22
|
5.0
|
41.8
|
1.0
|
CG2
|
C:THR28
|
5.0
|
30.0
|
1.0
|
N
|
C:THR28
|
5.0
|
32.2
|
1.0
|
|
Reference:
J.L.Fallon,
M.R.Baker,
L.Xiong,
R.E.Loy,
G.Yang,
R.T.Dirksen,
S.L.Hamilton,
F.A.Quiocho.
Crystal Structure of Dimeric Cardiac L-Type Calcium Channel Regulatory Domains Bridged By CA2+{Middle Dot}Calmodulins. Proc.Natl.Acad.Sci.Usa V. 106 5135 2009.
ISSN: ISSN 0027-8424
PubMed: 19279214
DOI: 10.1073/PNAS.0807487106
Page generated: Sat Jul 13 10:28:24 2024
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