Calcium in PDB 3gbh: Crystal Structure of A Putative Nad(P)H:Fmn Oxidoreductase (SE1966) From Staphylococcus Epidermidis Atcc 12228 at 2.00 A Resolution

The structure of Crystal Structure of A Putative Nad(P)H:Fmn Oxidoreductase (SE1966) From Staphylococcus Epidermidis Atcc 12228 at 2.00 A Resolution, PDB code: 3gbh was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.51 / 2.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	61.850, 86.150, 160.900, 90.00, 90.00, 90.00
R / Rfree (%)	14.6 / 18.5

The binding sites of Calcium atom in the Crystal Structure of A Putative Nad(P)H:Fmn Oxidoreductase (SE1966) From Staphylococcus Epidermidis Atcc 12228 at 2.00 A Resolution (pdb code 3gbh). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 5 binding sites of Calcium where determined in the Crystal Structure of A Putative Nad(P)H:Fmn Oxidoreductase (SE1966) From Staphylococcus Epidermidis Atcc 12228 at 2.00 A Resolution, PDB code: 3gbh:
Jump to Calcium binding site number: 1; 2; 3; 4; 5;

Calcium binding site 1 out of 5 in the Crystal Structure of A Putative Nad(P)H:Fmn Oxidoreductase (SE1966) From Staphylococcus Epidermidis Atcc 12228 at 2.00 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Putative Nad(P)H:Fmn Oxidoreductase (SE1966) From Staphylococcus Epidermidis Atcc 12228 at 2.00 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca217 b:20.3 occ:1.00 O B:HOH357 2.3 31.1 1.0 OD1 B:ASP113 2.5 21.6 1.0 CG B:ASP113 3.5 22.8 1.0 OD2 B:ASP113 3.8 27.6 1.0 O B:HOH344 4.5 30.2 1.0 CB B:THR111 4.7 20.9 1.0 N B:ASP113 4.7 20.7 1.0 N B:GLU112 4.8 18.4 1.0 CB B:ASP113 4.8 23.4 1.0 CB B:GLU112 4.8 18.8 1.0

Calcium binding site 2 out of 5 in the Crystal Structure of A Putative Nad(P)H:Fmn Oxidoreductase (SE1966) From Staphylococcus Epidermidis Atcc 12228 at 2.00 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of A Putative Nad(P)H:Fmn Oxidoreductase (SE1966) From Staphylococcus Epidermidis Atcc 12228 at 2.00 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca218 b:28.2 occ:1.00 O B:HOH565 2.2 27.0 1.0 OD1 B:ASP103 2.3 28.7 1.0 OE1 B:GLU106 2.4 27.8 1.0 O C:HOH373 2.5 21.1 1.0 OE2 B:GLU106 2.5 21.8 1.0 CD B:GLU106 2.8 23.5 1.0 O B:HOH575 2.9 40.0 1.0 CG B:ASP103 3.6 29.3 1.0 O B:HOH333 4.3 25.2 1.0 O C:HOH231 4.3 25.0 1.0 CG B:GLU106 4.3 23.0 1.0 OD2 B:ASP103 4.3 29.8 1.0 N B:ASP103 4.4 24.1 1.0 CA B:ASP103 4.4 24.4 1.0 O B:GLN99 4.5 24.7 1.0 CB B:ASP103 4.6 25.5 1.0 C B:GLY102 4.7 22.9 1.0 O B:GLY102 5.0 22.4 1.0

Calcium binding site 3 out of 5 in the Crystal Structure of A Putative Nad(P)H:Fmn Oxidoreductase (SE1966) From Staphylococcus Epidermidis Atcc 12228 at 2.00 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Crystal Structure of A Putative Nad(P)H:Fmn Oxidoreductase (SE1966) From Staphylococcus Epidermidis Atcc 12228 at 2.00 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca216 b:16.6 occ:1.00 OD1 D:ASP113 2.4 20.9 1.0 O C:HOH358 2.4 20.6 1.0 CG D:ASP113 3.4 23.4 1.0 OD2 D:ASP113 3.7 25.0 1.0 CB D:THR111 4.6 21.2 1.0 N D:ASP113 4.6 21.4 1.0 N D:GLU112 4.7 19.9 1.0 CB D:ASP113 4.8 21.6 1.0 CB D:GLU112 4.8 18.9 1.0 CG2 D:THR111 5.0 21.6 1.0

Calcium binding site 4 out of 5 in the Crystal Structure of A Putative Nad(P)H:Fmn Oxidoreductase (SE1966) From Staphylococcus Epidermidis Atcc 12228 at 2.00 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Crystal Structure of A Putative Nad(P)H:Fmn Oxidoreductase (SE1966) From Staphylococcus Epidermidis Atcc 12228 at 2.00 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca217 b:20.6 occ:1.00 O C:HOH396 2.3 15.7 1.0 OD1 D:ASP103 2.3 22.7 1.0 OE1 D:GLU106 2.4 23.9 1.0 O C:HOH268 2.4 23.3 1.0 O C:HOH437 2.4 14.9 1.0 OE2 D:GLU106 2.6 22.4 1.0 CD D:GLU106 2.8 26.1 1.0 CG D:ASP103 3.6 28.0 1.0 O C:HOH374 4.3 23.2 1.0 O C:HOH354 4.3 16.7 1.0 CA D:ASP103 4.3 22.6 1.0 CG D:GLU106 4.3 22.8 1.0 OD2 D:ASP103 4.3 27.4 1.0 N D:ASP103 4.3 21.1 1.0 O D:GLN99 4.5 23.9 1.0 CB D:ASP103 4.6 22.5 1.0 C D:GLY102 4.6 20.6 1.0 O D:GLY102 4.8 20.6 1.0

Calcium binding site 5 out of 5 in the Crystal Structure of A Putative Nad(P)H:Fmn Oxidoreductase (SE1966) From Staphylococcus Epidermidis Atcc 12228 at 2.00 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of Crystal Structure of A Putative Nad(P)H:Fmn Oxidoreductase (SE1966) From Staphylococcus Epidermidis Atcc 12228 at 2.00 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca218 b:51.7 occ:1.00 OD2 D:ASP180 2.5 43.1 1.0 OD2 D:ASP178 2.7 44.3 1.0 OD1 D:ASP178 2.8 39.5 1.0 CG D:ASP178 3.1 37.2 1.0 CG D:ASP180 3.5 39.1 1.0 CB D:ASP180 3.9 32.6 1.0 CB D:ASP178 4.5 29.5 1.0 OD1 D:ASP180 4.6 44.4 1.0 N D:ASP180 4.8 31.1 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.