Calcium in PDB 3gbp: Structure of the Periplasmic Glucose/Galactose Receptor of Salmonella Typhimurium

The structure of Structure of the Periplasmic Glucose/Galactose Receptor of Salmonella Typhimurium, PDB code: 3gbp was solved by S.L.Mowbray, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	N/A / 2.40
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	119.590, 37.280, 80.230, 90.00, 123.37, 90.00
R / Rfree (%)	15.8 / n/a

The binding sites of Calcium atom in the Structure of the Periplasmic Glucose/Galactose Receptor of Salmonella Typhimurium (pdb code 3gbp). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of the Periplasmic Glucose/Galactose Receptor of Salmonella Typhimurium, PDB code: 3gbp:

Calcium binding site 1 out of 1 in the Structure of the Periplasmic Glucose/Galactose Receptor of Salmonella Typhimurium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of the Periplasmic Glucose/Galactose Receptor of Salmonella Typhimurium within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca309 b:12.0 occ:1.00 OE1 A:GLN142 2.3 4.9 1.0 OD1 A:ASN136 2.3 11.4 1.0 O A:LYS140 2.4 13.9 1.0 OD1 A:ASP134 2.5 6.3 1.0 OD1 A:ASP138 2.5 11.9 1.0 OE2 A:GLU205 2.5 9.5 1.0 OE1 A:GLU205 2.6 13.2 1.0 CD A:GLU205 2.9 9.9 1.0 CG A:ASN136 3.5 6.7 1.0 CD A:GLN142 3.5 5.3 1.0 CG A:ASP138 3.5 14.3 1.0 C A:LYS140 3.6 11.4 1.0 H A:ASP138 3.6 0.0 1.0 CG A:ASP134 3.7 4.0 1.0 H A:ASN136 3.8 0.0 1.0 HE21 A:GLN142 3.8 0.0 1.0 HD21 A:ASN136 3.9 0.0 1.0 OD2 A:ASP138 4.0 16.8 1.0 H A:LYS140 4.0 0.0 1.0 ND2 A:ASN136 4.0 6.7 1.0 NE2 A:GLN142 4.0 5.8 1.0 H A:GLN142 4.1 0.0 1.0 O A:HOH409 4.2 13.2 1.0 N A:LYS140 4.3 12.8 1.0 CA A:ASP134 4.4 7.7 1.0 CG A:GLU205 4.4 6.0 1.0 N A:GLN142 4.4 3.3 1.0 OD2 A:ASP134 4.4 5.9 1.0 N A:ASN136 4.4 10.3 1.0 CA A:LYS140 4.4 11.9 1.0 CH2 A:TRP127 4.4 8.5 1.0 N A:ASP138 4.5 14.7 1.0 CB A:ASP134 4.6 2.5 1.0 N A:ILE141 4.6 9.3 1.0 CB A:ASN136 4.6 7.5 1.0 CG A:GLN142 4.6 2.0 1.0 C A:ASP134 4.6 11.1 1.0 CA A:ILE141 4.7 9.4 1.0 H2 A:HOH409 4.7 0.0 1.0 CB A:GLN142 4.7 2.0 1.0 CB A:ASP138 4.7 11.0 1.0 N A:LEU135 4.7 13.0 1.0 H A:LEU135 4.7 0.0 1.0 CB A:LYS140 4.7 11.1 1.0 CZ2 A:TRP127 4.8 9.4 1.0 C A:ILE141 4.8 6.5 1.0 N A:LYS137 4.9 11.2 1.0 CA A:ASN136 4.9 8.9 1.0 C A:ASN136 4.9 9.9 1.0 H A:LYS137 5.0 0.0 1.0 HE22 A:GLN142 5.0 0.0 1.0 HD22 A:ASN136 5.0 0.0 1.0

S.L.Mowbray, R.D.Smith, L.B.Cole. Structure of the Periplasmic Glucose/Galactose Receptor of Salmonella Typhimurium. Receptor V. 1 41 1990.
ISSN: ISSN 1052-8040
PubMed: 1967096