Atomistry » Calcium » PDB 3fyi-3ghg » 3gfj
Atomistry »
  Calcium »
    PDB 3fyi-3ghg »
      3gfj »

Calcium in PDB 3gfj: Crystal Structure of the ST1710 Mutant (R89A) Protein

Protein crystallography data

The structure of Crystal Structure of the ST1710 Mutant (R89A) Protein, PDB code: 3gfj was solved by T.Kumarevel, T.Tanaka, S.Yokoyama, Riken Structural Genomics/Proteomicsinitiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.66 / 2.20
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 45.862, 45.862, 138.170, 90.00, 90.00, 90.00
R / Rfree (%) 20.1 / 24.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the ST1710 Mutant (R89A) Protein (pdb code 3gfj). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the ST1710 Mutant (R89A) Protein, PDB code: 3gfj:

Calcium binding site 1 out of 1 in 3gfj

Go back to Calcium Binding Sites List in 3gfj
Calcium binding site 1 out of 1 in the Crystal Structure of the ST1710 Mutant (R89A) Protein


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the ST1710 Mutant (R89A) Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca147

b:49.9
occ:1.00
O A:GLU143 2.7 31.6 1.0
OXT A:GLN146 2.8 48.1 1.0
C A:GLN146 3.4 47.8 1.0
O A:GLN146 3.4 48.4 1.0
C A:GLU143 3.8 31.6 1.0
CA A:GLU143 4.6 30.8 1.0
O A:ILE144 4.7 35.9 1.0
CA A:GLN146 4.8 46.9 1.0
N A:ILE144 4.8 33.5 1.0
CA A:ILE144 5.0 34.9 1.0

Reference:

T.Kumarevel, T.Tanaka, T.Umehara, S.Yokoyama. ST1710-Dna Complex Crystal Structure Reveals the Dna Binding Mechanism of the Marr Family of Regulators. Nucleic Acids Res. V. 37 4723 2009.
ISSN: ISSN 0305-1048
PubMed: 19509310
DOI: 10.1093/NAR/GKP496
Page generated: Sat Jul 13 10:36:17 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy