Atomistry » Calcium » PDB 3gif-3gy5 » 3goa
Atomistry »
  Calcium »
    PDB 3gif-3gy5 »
      3goa »

Calcium in PDB 3goa: Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase

Enzymatic activity of Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase

All present enzymatic activity of Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase:
2.3.1.16;

Protein crystallography data

The structure of Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase, PDB code: 3goa was solved by S.M.Anderson, T.Skarina, O.Onopriyenko, Z.Wawrzak, L.Papazisi, A.Savchenko, W.F.Anderson, Center For Structural Genomics Ofinfectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.70
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 73.000, 64.500, 74.400, 90.00, 104.50, 90.00
R / Rfree (%) 14.2 / 19.2

Other elements in 3goa:

The structure of Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Sodium (Na) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase (pdb code 3goa). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase, PDB code: 3goa:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 3goa

Go back to Calcium Binding Sites List in 3goa
Calcium binding site 1 out of 2 in the Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca388

b:29.4
occ:1.00
O B:HOH694 2.2 19.1 1.0
O B:HOH756 2.3 31.9 1.0
O B:HOH419 2.4 27.5 1.0
O B:HOH773 2.5 26.4 1.0
O B:HOH857 3.8 33.1 1.0
O B:HOH728 4.2 20.2 1.0
O B:HOH494 4.4 16.6 1.0
O B:HOH961 4.4 17.8 0.5
O B:HOH623 4.5 22.9 1.0
OD1 B:ASN42 4.6 15.3 1.0
OD2 B:ASP8 4.8 11.7 1.0
CG B:ASP8 4.8 14.1 1.0
OD1 B:ASP8 4.8 12.4 1.0
O B:VAL7 4.8 11.8 1.0
NH2 B:ARG41 5.0 16.0 1.0
O B:ARG41 5.0 14.2 1.0

Calcium binding site 2 out of 2 in 3goa

Go back to Calcium Binding Sites List in 3goa
Calcium binding site 2 out of 2 in the Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of the Salmonella Typhimurium Fada 3-Ketoacyl-Coa Thiolase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca389

b:54.6
occ:1.00
O B:HOH935 2.3 27.6 1.0
O B:HOH936 2.3 41.6 1.0
O B:HOH601 2.4 31.5 1.0
O B:HOH512 2.6 27.7 1.0
O B:HOH835 2.7 40.3 1.0
OE1 B:GLN366 4.1 22.9 1.0
O B:HOH572 4.4 30.4 1.0
OD1 B:ASP303 4.4 20.3 1.0
O B:ASP301 4.4 15.6 1.0
O B:HOH788 4.5 43.0 1.0
OD2 B:ASP303 4.7 18.2 1.0

Reference:

S.M.Anderson, T.Skarina, O.Onopriyenko, Z.Wawrzak, L.Papazisi, A.Savchenko, W.F.Anderson, Center For Structural Genomics Ofinfectious Diseases (Csgid). N/A N/A.
Page generated: Tue Jul 8 12:46:55 2025

Last articles

Ca in 7NSN
Ca in 7NZG
Ca in 7NZ6
Ca in 7NZ1
Ca in 7NYV
Ca in 7NYU
Ca in 7NYR
Ca in 7NXD
Ca in 7NYJ
Ca in 7NXV
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy