Calcium in PDB 3gp2: Calmodulin Bound to Peptide From Calmodulin Kinase II (Camkii)

All present enzymatic activity of Calmodulin Bound to Peptide From Calmodulin Kinase II (Camkii):
2.7.11.17;

The structure of Calmodulin Bound to Peptide From Calmodulin Kinase II (Camkii), PDB code: 3gp2 was solved by H.L.Ng, T.A.Alber, A.J.Wand, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	25.08 / 1.46
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	69.599, 38.409, 75.012, 90.00, 125.27, 90.00
R / Rfree (%)	16 / 19.2

The binding sites of Calcium atom in the Calmodulin Bound to Peptide From Calmodulin Kinase II (Camkii) (pdb code 3gp2). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Calmodulin Bound to Peptide From Calmodulin Kinase II (Camkii), PDB code: 3gp2:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in the Calmodulin Bound to Peptide From Calmodulin Kinase II (Camkii)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Calmodulin Bound to Peptide From Calmodulin Kinase II (Camkii) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca148 b:20.2 occ:1.00 OD1 A:ASP20 2.3 21.3 1.0 O A:THR26 2.3 19.6 1.0 OD1 A:ASP24 2.4 25.4 1.0 OD1 A:ASP22 2.4 25.8 1.0 O A:HOH286 2.5 26.5 1.0 OE2 A:GLU31 2.5 21.3 1.0 OE1 A:GLU31 2.6 17.6 1.0 CD A:GLU31 2.9 18.4 1.0 CG A:ASP22 3.4 26.3 1.0 CG A:ASP24 3.4 27.6 1.0 CG A:ASP20 3.4 17.9 1.0 C A:THR26 3.5 18.0 1.0 OD2 A:ASP22 3.7 27.6 1.0 OD2 A:ASP24 4.0 30.2 1.0 CA A:ASP20 4.1 17.8 1.0 OG1 A:THR26 4.1 30.0 1.0 CB A:ASP20 4.2 17.2 1.0 N A:THR26 4.2 21.0 1.0 OD2 A:ASP20 4.3 21.8 1.0 N A:ASP24 4.3 25.8 1.0 CG A:GLU31 4.4 16.1 1.0 CA A:THR26 4.4 21.9 1.0 N A:ILE27 4.5 16.1 1.0 CB A:ASP24 4.5 26.8 1.0 C A:ASP20 4.5 19.6 1.0 CA A:ILE27 4.5 14.9 1.0 N A:ASP22 4.6 26.8 1.0 CB A:ASP22 4.7 26.3 1.0 O A:HOH287 4.7 25.4 1.0 CA A:ASP24 4.8 25.4 1.0 N A:LYS21 4.8 23.0 1.0 N A:GLY25 4.8 23.1 1.0 O A:HOH217 4.8 27.9 1.0 N A:GLY23 4.8 25.8 1.0 N A:THR28 4.9 16.0 1.0 CB A:THR26 4.9 24.2 1.0 CA A:ASP22 5.0 26.9 1.0 CG2 A:THR28 5.0 19.4 1.0 C A:ASP24 5.0 24.7 1.0

Calcium binding site 2 out of 4 in the Calmodulin Bound to Peptide From Calmodulin Kinase II (Camkii)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Calmodulin Bound to Peptide From Calmodulin Kinase II (Camkii) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca149 b:14.1 occ:1.00 O A:TYR99 2.2 15.8 1.0 OD1 A:ASP93 2.3 16.4 1.0 OD1 A:ASP95 2.4 16.6 1.0 O A:HOH294 2.4 15.0 1.0 OD1 A:ASN97 2.4 15.6 1.0 OE1 A:GLU104 2.4 13.1 1.0 OE2 A:GLU104 2.6 16.3 1.0 CD A:GLU104 2.8 13.3 1.0 CG A:ASP95 3.3 17.5 1.0 CG A:ASN97 3.4 16.5 1.0 C A:TYR99 3.5 13.1 1.0 CG A:ASP93 3.5 15.4 1.0 OD2 A:ASP95 3.7 19.2 1.0 ND2 A:ASN97 4.1 17.9 1.0 CA A:ASP93 4.2 15.2 1.0 N A:TYR99 4.2 14.9 1.0 N A:ASN97 4.2 17.8 1.0 CB A:ASP93 4.3 14.9 1.0 CB A:ASN97 4.3 17.3 1.0 OD2 A:ASP93 4.3 16.4 1.0 CA A:TYR99 4.3 14.3 1.0 CG A:GLU104 4.4 12.0 1.0 N A:ILE100 4.4 11.9 1.0 O A:HOH284 4.5 22.4 1.0 C A:ASP93 4.5 17.0 1.0 N A:ASP95 4.5 17.6 1.0 CB A:ASP95 4.5 17.4 1.0 CA A:ILE100 4.5 11.8 1.0 N A:SER101 4.6 11.5 1.0 CA A:ASN97 4.6 17.2 1.0 N A:GLY96 4.7 19.4 1.0 O A:HOH193 4.7 17.8 1.0 N A:LYS94 4.7 17.0 1.0 N A:GLY98 4.8 16.0 1.0 CB A:TYR99 4.8 12.2 1.0 CA A:ASP95 4.8 16.7 1.0 C A:ASN97 4.9 16.2 1.0 C A:ASP95 4.9 19.4 1.0 O A:ASP93 5.0 17.9 1.0 O A:HOH237 5.0 21.7 1.0

Calcium binding site 3 out of 4 in the Calmodulin Bound to Peptide From Calmodulin Kinase II (Camkii)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Calmodulin Bound to Peptide From Calmodulin Kinase II (Camkii) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca150 b:14.4 occ:1.00 OD1 A:ASP129 2.3 15.7 1.0 OD1 A:ASP133 2.4 13.0 1.0 O A:GLN135 2.4 13.1 1.0 OD1 A:ASP131 2.4 15.3 1.0 O A:HOH201 2.4 15.7 1.0 OE1 A:GLU140 2.4 14.0 1.0 OE2 A:GLU140 2.6 15.5 1.0 CD A:GLU140 2.9 14.9 1.0 CG A:ASP131 3.2 17.2 1.0 CG A:ASP133 3.3 14.2 1.0 CG A:ASP129 3.5 13.0 1.0 C A:GLN135 3.5 12.4 1.0 OD2 A:ASP131 3.6 18.2 1.0 OD2 A:ASP133 3.7 15.9 1.0 N A:ASP133 4.2 16.0 1.0 CA A:ASP129 4.2 15.1 1.0 N A:ASP131 4.3 18.1 1.0 N A:GLN135 4.3 12.7 1.0 CB A:ASP129 4.3 15.0 1.0 OD2 A:ASP129 4.3 16.6 1.0 CA A:VAL136 4.3 12.8 1.0 N A:VAL136 4.4 12.5 1.0 CG A:GLU140 4.4 15.1 1.0 CB A:ASP133 4.4 14.4 1.0 N A:ASN137 4.5 13.6 1.0 CB A:ASP131 4.5 18.0 1.0 N A:GLY132 4.5 17.3 1.0 C A:ASP129 4.5 16.2 1.0 CA A:GLN135 4.5 13.0 1.0 CA A:ASP131 4.6 17.7 1.0 CA A:ASP133 4.7 15.2 1.0 N A:ILE130 4.7 16.5 1.0 CG A:GLN135 4.7 18.4 1.0 C A:ASP131 4.7 18.0 1.0 N A:GLY134 4.8 13.6 1.0 C A:VAL136 4.9 12.3 1.0 C A:ASP133 4.9 14.4 1.0 CG A:ASN137 5.0 14.9 1.0

Calcium binding site 4 out of 4 in the Calmodulin Bound to Peptide From Calmodulin Kinase II (Camkii)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Calmodulin Bound to Peptide From Calmodulin Kinase II (Camkii) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca151 b:21.8 occ:1.00 OD1 A:ASP56 2.2 23.9 1.0 O A:THR62 2.3 19.4 1.0 O A:HOH288 2.4 25.3 1.0 OD1 A:ASN60 2.4 25.0 1.0 OD1 A:ASP58 2.4 26.3 1.0 OE1 A:GLU67 2.5 18.3 1.0 OE2 A:GLU67 2.6 19.4 1.0 CD A:GLU67 2.9 18.1 1.0 CG A:ASP58 3.4 27.0 1.0 CG A:ASN60 3.4 25.4 1.0 CG A:ASP56 3.4 22.1 1.0 C A:THR62 3.5 19.3 1.0 O A:HOH305 3.7 32.2 1.0 OD2 A:ASP58 3.8 30.1 1.0 ND2 A:ASN60 4.0 26.7 1.0 N A:ASN60 4.2 25.5 1.0 CA A:ASP56 4.2 20.1 1.0 N A:THR62 4.2 21.8 1.0 OD2 A:ASP56 4.3 23.3 1.0 CB A:ASP56 4.4 20.6 1.0 CG A:GLU67 4.4 16.3 1.0 N A:ILE63 4.4 17.9 1.0 CA A:ILE63 4.5 16.5 1.0 CA A:THR62 4.5 20.0 1.0 N A:ASP58 4.5 23.7 1.0 CB A:ASN60 4.5 25.7 1.0 OG1 A:THR62 4.6 25.1 1.0 C A:ASP56 4.6 21.5 1.0 N A:ASP64 4.6 16.0 1.0 O A:HOH289 4.6 25.1 1.0 CB A:ASP58 4.7 26.8 1.0 N A:GLY61 4.7 25.0 1.0 N A:GLY59 4.7 27.3 1.0 CA A:ASN60 4.7 25.2 1.0 N A:ALA57 4.8 21.4 1.0 OD2 A:ASP64 4.8 28.3 1.0 C A:ASN60 4.9 25.1 1.0 CA A:ASP58 4.9 25.8 1.0 CG A:ASP64 4.9 20.4 1.0 C A:ILE63 4.9 17.5 1.0 C A:ASP58 5.0 26.7 1.0

H.L.Ng, T.A.Alber, A.J.Wand. Calmodulin Bound to Peptide From Calmodulin Kinase II (Camkii) To Be Published.