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Calcium in PDB 3h3p: Crystal Structure of Hiv Epitope-Scaffold 4E10 Fv Complex

Protein crystallography data

The structure of Crystal Structure of Hiv Epitope-Scaffold 4E10 Fv Complex, PDB code: 3h3p was solved by M.A.Holmes, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 60.08 / 2.70
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 92.400, 92.400, 272.790, 90.00, 90.00, 120.00
R / Rfree (%) 22.9 / 28.7

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Hiv Epitope-Scaffold 4E10 Fv Complex (pdb code 3h3p). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Hiv Epitope-Scaffold 4E10 Fv Complex, PDB code: 3h3p:

Calcium binding site 1 out of 1 in 3h3p

Go back to Calcium Binding Sites List in 3h3p
Calcium binding site 1 out of 1 in the Crystal Structure of Hiv Epitope-Scaffold 4E10 Fv Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Hiv Epitope-Scaffold 4E10 Fv Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Ca136

b:57.5
occ:1.00
O H:HOH149 2.3 36.1 1.0
O H:THR19 2.4 26.5 1.0
O I:HOH150 2.5 51.2 1.0
OE1 H:GLU10 2.9 35.8 1.0
OE2 H:GLU10 3.0 34.9 1.0
CD H:GLU10 3.2 35.3 1.0
OE2 I:GLU10 3.3 36.6 1.0
OG1 H:THR19 3.4 28.9 1.0
C H:THR19 3.6 26.4 1.0
N H:THR19 4.2 25.9 1.0
CA H:THR19 4.3 26.6 1.0
CD I:GLU10 4.4 35.1 1.0
CB H:THR19 4.5 26.7 1.0
CG H:GLU10 4.6 34.6 1.0
O H:HOH141 4.6 51.5 1.0
N H:VAL20 4.6 26.3 1.0
CA H:VAL20 4.9 26.1 1.0

Reference:

H.Xu, L.Song, M.Kim, M.A.Holmes, Z.Kraft, G.Sellhorn, E.L.Reinherz, L.Stamatatos, R.K.Strong. Interactions Between Lipids and Human Anti-Hiv Antibody 4E10 Can Be Reduced Without Ablating Neutralizing Activity J.Virol. V. 84 1076 2010.
ISSN: ISSN 0022-538X
PubMed: 19906921
DOI: 10.1128/JVI.02113-09
Page generated: Sat Dec 12 04:13:41 2020

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