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Calcium in PDB 3hai: Crystal Structure of Human PACSIN1 F-Bar Domain (P21 Lattice)

Protein crystallography data

The structure of Crystal Structure of Human PACSIN1 F-Bar Domain (P21 Lattice), PDB code: 3hai was solved by Q.Wang, M.V.A.S.Navarro, G.Peng, K.R.Rajashankar, H.Sondermann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.52 / 2.88
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 163.620, 32.160, 181.160, 90.00, 111.23, 90.00
R / Rfree (%) 28.2 / 31.9

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Human PACSIN1 F-Bar Domain (P21 Lattice) (pdb code 3hai). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Human PACSIN1 F-Bar Domain (P21 Lattice), PDB code: 3hai:

Calcium binding site 1 out of 1 in 3hai

Go back to Calcium Binding Sites List in 3hai
Calcium binding site 1 out of 1 in the Crystal Structure of Human PACSIN1 F-Bar Domain (P21 Lattice)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Human PACSIN1 F-Bar Domain (P21 Lattice) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca310

b:0.7
occ:1.00
O A:GLN76 3.3 52.3 1.0
O A:GLU72 3.3 61.9 1.0
O A:GLY74 3.5 58.1 1.0
OE1 A:GLU81 3.7 58.6 1.0
OE2 A:GLU81 3.7 55.7 1.0
CD A:GLU81 4.0 57.8 1.0
C A:GLN76 4.3 43.7 1.0
C A:GLU72 4.3 61.7 1.0
O A:ILE71 4.4 59.0 1.0
C A:GLY74 4.7 53.9 1.0
CA A:TYR77 4.7 45.9 1.0
CB A:TYR77 4.8 48.8 1.0

Reference:

Q.Wang, M.V.Navarro, G.Peng, E.Molinelli, S.Lin Goh, B.L.Judson, K.R.Rajashankar, H.Sondermann. Molecular Mechanism of Membrane Constriction and Tubulation Mediated By the F-Bar Protein Pacsin/Syndapin. Proc.Natl.Acad.Sci.Usa V. 106 12700 2009.
ISSN: ISSN 0027-8424
PubMed: 19549836
DOI: 10.1073/PNAS.0902974106
Page generated: Sat Dec 12 04:13:49 2020

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