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Calcium in PDB 3hq7: Ccpa From G. Sulfurreducens, G94K/K97Q/R100I Variant

Enzymatic activity of Ccpa From G. Sulfurreducens, G94K/K97Q/R100I Variant

All present enzymatic activity of Ccpa From G. Sulfurreducens, G94K/K97Q/R100I Variant:
1.11.1.5;

Protein crystallography data

The structure of Ccpa From G. Sulfurreducens, G94K/K97Q/R100I Variant, PDB code: 3hq7 was solved by M.Hoffmann, J.Seidel, O.Einsle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 70.00 / 2.31
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 99.299, 99.353, 78.225, 89.97, 89.98, 90.00
R / Rfree (%) 20.9 / 29.4

Other elements in 3hq7:

The structure of Ccpa From G. Sulfurreducens, G94K/K97Q/R100I Variant also contains other interesting chemical elements:

Iron (Fe) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Ccpa From G. Sulfurreducens, G94K/K97Q/R100I Variant (pdb code 3hq7). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Ccpa From G. Sulfurreducens, G94K/K97Q/R100I Variant, PDB code: 3hq7:

Calcium binding site 1 out of 1 in 3hq7

Go back to Calcium Binding Sites List in 3hq7
Calcium binding site 1 out of 1 in the Ccpa From G. Sulfurreducens, G94K/K97Q/R100I Variant


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Ccpa From G. Sulfurreducens, G94K/K97Q/R100I Variant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca403

b:19.3
occ:1.00
O A:HOH468 1.7 25.7 1.0
O A:HOH469 2.1 14.8 1.0
OD1 A:ASN101 2.4 28.7 1.0
O A:THR278 2.4 27.1 1.0
O A:PRO280 2.5 35.5 1.0
CG A:ASN101 3.4 29.8 1.0
C A:THR278 3.7 28.7 1.0
ND2 A:ASN101 3.7 24.5 1.0
C A:PRO280 3.7 33.6 1.0
O A:HOH471 4.0 25.1 1.0
O A:HOH503 4.2 31.4 1.0
C A:TYR279 4.2 30.5 1.0
O A:TYR279 4.2 32.6 1.0
N A:PRO280 4.3 31.2 1.0
O A:HOH354 4.4 24.6 1.0
OG1 A:THR278 4.4 26.0 1.0
O A:ALA102 4.4 28.9 1.0
O2A A:HEM402 4.4 25.0 1.0
CB A:THR278 4.4 26.4 1.0
CA A:TYR281 4.5 33.4 1.0
O1A A:HEM402 4.5 31.6 1.0
N A:TYR279 4.5 27.7 1.0
O A:HOH409 4.5 24.4 1.0
CA A:TYR279 4.5 29.7 1.0
N A:TYR281 4.5 34.0 1.0
CA A:THR278 4.7 27.6 1.0
CB A:ASN101 4.7 33.1 1.0
CA A:PRO280 4.7 31.9 1.0
CD A:PRO280 4.8 29.6 1.0
CGA A:HEM402 4.9 33.3 1.0
CD2 A:TYR281 4.9 30.1 1.0

Reference:

M.Hoffmann, J.Seidel, O.Einsle. Ccpa From Geobacter Sulfurreducens Is A Basic Di-Heme Cytochrome C Peroxidase. J.Mol.Biol. V. 393 951 2009.
ISSN: ISSN 0022-2836
PubMed: 19735665
DOI: 10.1016/J.JMB.2009.09.001
Page generated: Sat Jul 13 11:10:15 2024

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