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Calcium in PDB 3im9: Crystal Structure of Mcat From Staphylococcus Aureus

Enzymatic activity of Crystal Structure of Mcat From Staphylococcus Aureus

All present enzymatic activity of Crystal Structure of Mcat From Staphylococcus Aureus:
2.3.1.39;

Protein crystallography data

The structure of Crystal Structure of Mcat From Staphylococcus Aureus, PDB code: 3im9 was solved by S.K.Hong, K.H.Kim, J.K.Park, Y.M.Kim, E.E.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.35 / 1.46
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.157, 87.914, 43.237, 90.00, 104.00, 90.00
R / Rfree (%) 15.7 / 18.4

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Mcat From Staphylococcus Aureus (pdb code 3im9). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Mcat From Staphylococcus Aureus, PDB code: 3im9:

Calcium binding site 1 out of 1 in 3im9

Go back to Calcium Binding Sites List in 3im9
Calcium binding site 1 out of 1 in the Crystal Structure of Mcat From Staphylococcus Aureus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Mcat From Staphylococcus Aureus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca601

b:27.1
occ:1.00
OE1 A:GLN248 2.6 12.7 1.0
O A:MET245 2.7 11.5 1.0
OH A:TYR93 2.7 12.4 1.0
NE A:ARG114 3.0 10.5 1.0
CE1 A:TYR93 3.5 10.2 1.0
CZ A:TYR93 3.5 9.8 1.0
CD2 A:LEU249 3.6 16.4 1.0
CD A:GLN248 3.7 10.7 1.0
C A:MET245 3.7 11.8 1.0
CD A:ARG114 3.8 11.6 1.0
NH2 A:ARG114 3.9 11.3 1.0
CZ A:ARG114 3.9 9.7 1.0
CB A:GLN248 3.9 10.2 1.0
CG A:LEU249 3.9 12.7 1.0
CE1 A:PHE210 4.0 13.5 1.0
CE A:MET245 4.0 10.4 1.0
CA A:MET245 4.1 10.0 1.0
CB A:MET245 4.3 11.0 1.0
CG A:GLN248 4.4 10.3 1.0
N A:LEU249 4.4 10.1 1.0
CZ A:PHE210 4.4 10.9 1.0
NE2 A:GLN248 4.6 9.2 1.0
CG A:ARG114 4.6 9.9 1.0
C A:GLN248 4.8 10.9 1.0
CE2 A:TYR93 4.8 10.8 1.0
CD1 A:TYR93 4.9 9.6 1.0
CA A:GLN248 4.9 11.7 1.0
N A:VAL246 4.9 10.5 1.0
CD1 A:PHE210 4.9 12.2 1.0
CA A:LEU249 4.9 9.4 1.0
CD1 A:LEU249 4.9 13.0 1.0

Reference:

S.K.Hong, K.H.Kim, J.K.Park, K.-W.Jeong, Y.M.Kim, E.E.Kim. New Design Platform For Malonyl-Coa-Acyl Carrier Protein Transacylase Febs Lett. V. 584 1240 2010.
ISSN: ISSN 0014-5793
PubMed: 20176020
DOI: 10.1016/J.FEBSLET.2010.02.038
Page generated: Sat Jul 13 11:38:30 2024

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