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Calcium in PDB 3iow: Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg

Protein crystallography data

The structure of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg, PDB code: 3iow was solved by M.W.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 3.50
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 101.097, 162.770, 139.660, 90.00, 98.85, 90.00
R / Rfree (%) 24.3 / 28.1

Other elements in 3iow:

The structure of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg also contains other interesting chemical elements:

Zinc (Zn) 7 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg (pdb code 3iow). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 10 binding sites of Calcium where determined in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg, PDB code: 3iow:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Calcium binding site 1 out of 10 in 3iow

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Calcium binding site 1 out of 10 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca504

b:73.3
occ:0.50
 OE2 A:GLU291 2.9 78.8 1.0
CD A:GLU291 3.8 78.6 1.0
OE1 A:GLU291 4.1 78.7 1.0
OE2 A:GLU310 4.6 79.1 1.0
CA A:CA507 4.7 80.2 0.5
CG A:GLU291 5.0 78.4 1.0

Calcium binding site 2 out of 10 in 3iow

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Calcium binding site 2 out of 10 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca505

b:73.3
occ:0.50
 OE2 A:GLU38 3.0 78.6 1.0
OE1 A:GLU38 3.4 78.5 1.0
CD A:GLU38 3.6 78.4 1.0

Calcium binding site 3 out of 10 in 3iow

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Calcium binding site 3 out of 10 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca506

b:83.3
occ:1.00
 O A:ASP296 2.5 78.1 1.0
OD1 A:ASP296 3.0 78.5 1.0
NZ A:LYS297 3.5 77.4 0.5
C A:ASP296 3.5 78.1 1.0
CA A:ASP296 4.0 78.2 1.0
CG A:ASP296 4.1 78.3 1.0
CG A:LYS297 4.6 78.0 0.5
CB A:ASP296 4.7 78.2 1.0
N A:LYS297 4.7 78.1 1.0
CE A:LYS297 4.8 77.8 0.5
OD2 A:ASP296 4.9 78.8 1.0
O A:LYS295 5.0 78.2 1.0

Calcium binding site 4 out of 10 in 3iow

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Calcium binding site 4 out of 10 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca507

b:80.2
occ:0.50
 OD2 A:ASP287 4.1 78.6 1.0
CB A:ASP287 4.3 78.2 1.0
CD A:GLU310 4.5 78.8 1.0
CG A:ASP287 4.6 78.4 1.0
CG A:GLU310 4.6 78.5 1.0
CA A:CA504 4.7 73.3 0.5
OE2 A:GLU310 4.7 79.1 1.0
OE1 A:GLU291 4.8 78.7 1.0
OE1 A:GLU310 4.9 79.0 1.0

Calcium binding site 5 out of 10 in 3iow

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Calcium binding site 5 out of 10 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca508

b:0.8
occ:1.00
 OD1 A:ASP82 2.9 78.4 1.0
OD2 A:ASP82 3.1 78.5 1.0
CG A:ASP82 3.3 78.4 1.0
CB A:ALA84 4.5 78.2 1.0
CB A:ASP82 4.6 78.2 1.0

Calcium binding site 6 out of 10 in 3iow

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Calcium binding site 6 out of 10 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca503

b:86.1
occ:1.00
 OE1 B:GLU38 3.0 79.5 1.0
OE2 B:GLU38 3.1 79.6 1.0
CD B:GLU38 3.3 79.3 1.0
CG B:GLU38 4.7 78.9 1.0

Calcium binding site 7 out of 10 in 3iow

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Calcium binding site 7 out of 10 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca503

b:94.1
occ:1.00
 OE2 C:GLU38 3.1 78.1 1.0
OE1 C:GLU38 3.4 77.8 1.0
CD C:GLU38 3.6 78.1 1.0
CG C:GLU38 5.0 78.1 1.0

Calcium binding site 8 out of 10 in 3iow

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Calcium binding site 8 out of 10 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca504

b:94.7
occ:1.00
 OD1 C:ASP82 3.2 78.6 1.0
OD2 C:ASP82 3.4 78.7 1.0
CG C:ASP82 3.6 78.5 1.0
CB C:ASP82 4.9 78.3 1.0
CB C:ALA84 5.0 78.2 1.0

Calcium binding site 9 out of 10 in 3iow

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Calcium binding site 9 out of 10 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 9 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca505

b:78.7
occ:1.00
 OD1 C:ASP296 2.5 78.5 1.0
NZ C:LYS297 2.6 79.3 1.0
O C:ASP296 3.3 78.1 1.0
CG C:ASP296 3.6 78.3 1.0
CE C:LYS297 3.7 79.5 1.0
CD C:LYS297 3.9 79.2 1.0
C C:ASP296 4.1 78.1 1.0
OD2 C:ASP296 4.3 78.8 1.0
CA C:ASP296 4.3 78.2 1.0
CB C:ASP296 4.6 78.2 1.0
OD1 C:ASN18 4.9 78.8 1.0

Calcium binding site 10 out of 10 in 3iow

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Calcium binding site 10 out of 10 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 10 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C99-Hg within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca506

b:70.2
occ:0.50
 OE1 C:GLU138 3.9 78.8 1.0
CD C:GLU138 5.0 78.8 1.0
NZ C:LYS142 5.0 78.5 1.0

Reference:

M.W.Kim, Y.Chelliah, S.W.Kim, Z.Otwinowski, I.Bezprozvanny. Secondary Structure of Huntingtin Amino-Terminal Region. Structure V. 17 1205 2009.
ISSN: ISSN 0969-2126
PubMed: 19748341
DOI: 10.1016/J.STR.2009.08.002
Page generated: Sat Jul 13 11:43:08 2024

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