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Calcium in PDB 3j2q: Model of Membrane-Bound Factor VIII Organized in 2D Crystals

Other elements in 3j2q:

The structure of Model of Membrane-Bound Factor VIII Organized in 2D Crystals also contains other interesting chemical elements:

Copper (Cu) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Model of Membrane-Bound Factor VIII Organized in 2D Crystals (pdb code 3j2q). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Model of Membrane-Bound Factor VIII Organized in 2D Crystals, PDB code: 3j2q:

Calcium binding site 1 out of 1 in 3j2q

Go back to Calcium Binding Sites List in 3j2q
Calcium binding site 1 out of 1 in the Model of Membrane-Bound Factor VIII Organized in 2D Crystals


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Model of Membrane-Bound Factor VIII Organized in 2D Crystals within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca804

b:0.2
occ:1.00
O A:GLU122 2.6 0.0 1.0
O A:LYS107 2.7 0.0 1.0
OD2 A:ASP126 2.7 0.0 1.0
OD1 A:ASP125 2.8 0.0 1.0
OD1 A:ASP126 3.0 0.0 1.0
CG A:ASP126 3.2 0.0 1.0
OD2 A:ASP125 3.4 0.0 1.0
O A:SER109 3.5 0.0 1.0
CG A:ASP125 3.5 0.0 1.0
OD1 A:ASP116 3.5 0.0 1.0
OE1 A:GLU110 3.6 0.0 1.0
CG2 A:THR118 3.6 0.0 1.0
OD2 A:ASP116 3.7 0.0 1.0
C A:LYS107 3.8 0.0 1.0
C A:GLU122 3.8 0.0 1.0
CG A:ASP116 4.0 0.0 1.0
CA A:LYS123 4.3 0.0 1.0
CB A:GLU110 4.4 0.0 1.0
CA A:LYS107 4.5 0.0 1.0
N A:LYS123 4.5 0.0 1.0
CB A:THR118 4.6 0.0 1.0
CB A:ASP126 4.6 0.0 1.0
C A:SER109 4.6 0.0 1.0
O A:ALA112 4.7 0.0 1.0
CD A:GLU110 4.7 0.0 1.0
CB A:LYS107 4.7 0.0 1.0
OG1 A:THR118 4.8 0.0 1.0
N A:ALA108 4.9 0.0 1.0
C A:LYS123 4.9 0.0 1.0
N A:ASP126 5.0 0.0 1.0
CA A:GLU122 5.0 0.0 1.0
CB A:ASP125 5.0 0.0 1.0

Reference:

S.Stoilova-Mcphie, G.C.Lynch, S.Ludtke, B.M.Pettitt. Domain Organization of Membrane-Bound Factor VIII. Biopolymers V. 99 448 2013.
ISSN: ISSN 0006-3525
PubMed: 23616213
DOI: 10.1002/BIP.22199
Page generated: Sat Jul 13 11:49:11 2024

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