Calcium in PDB 3j82: Electron Cryo-Microscopy of Dngr-1 in Complex with F-Actin

The binding sites of Calcium atom in the Electron Cryo-Microscopy of Dngr-1 in Complex with F-Actin (pdb code 3j82). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Electron Cryo-Microscopy of Dngr-1 in Complex with F-Actin, PDB code: 3j82:

Calcium binding site 1 out of 1 in the Electron Cryo-Microscopy of Dngr-1 in Complex with F-Actin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Electron Cryo-Microscopy of Dngr-1 in Complex with F-Actin within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca301 b:0.0 occ:1.00 OE2 A:GLU256 2.2 0.0 1.0 OE1 A:GLU256 2.9 0.0 1.0 CD A:GLU256 2.9 0.0 1.0 O A:GLN174 3.5 0.0 1.0 OE2 A:GLU180 3.8 0.0 1.0 OE1 A:GLU180 3.9 0.0 1.0 OG A:SER147 4.2 0.0 1.0 CD A:GLU180 4.2 0.0 1.0 OD1 A:ASP176 4.3 0.0 1.0 CG A:GLU256 4.3 0.0 1.0 OD2 A:ASP176 4.3 0.0 1.0 CG A:ASP176 4.4 0.0 1.0 C A:GLN174 4.5 0.0 1.0 OH A:TYR149 4.8 0.0 1.0 N A:GLN174 4.9 0.0 1.0

P.Hanc, T.Fujii, S.Iborra, Y.Yamada, J.Huotari, O.Schulz, S.Ahrens, S.Kjaer, M.Way, D.Sancho, K.Namba, C.Reis E Sousa. Structure of the Complex of F-Actin and Dngr-1, A C-Type Lectin Receptor Involved in Dendritic Cell Cross-Presentation of Dead Cell-Associated Antigens Immunity V. 42 839 2015.
ISSN: ISSN 1074-7613
DOI: 10.1016/J.IMMUNI.2015.04.009