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Calcium in PDB 3jql: Crystal Structure of the Complex Formed Between Phospholipase A2 and A Hexapeptide Fragment of Amyloid Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala at 1.2 A Resolution

Enzymatic activity of Crystal Structure of the Complex Formed Between Phospholipase A2 and A Hexapeptide Fragment of Amyloid Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala at 1.2 A Resolution

All present enzymatic activity of Crystal Structure of the Complex Formed Between Phospholipase A2 and A Hexapeptide Fragment of Amyloid Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala at 1.2 A Resolution:
3.1.1.4;

Protein crystallography data

The structure of Crystal Structure of the Complex Formed Between Phospholipase A2 and A Hexapeptide Fragment of Amyloid Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala at 1.2 A Resolution, PDB code: 3jql was solved by Z.Mirza, G.Vikram, N.Singh, M.Sinha, S.Sharma, A.Srinivasan, P.Kaur, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.00 / 1.20
Space group P 41
Cell size a, b, c (Å), α, β, γ (°) 42.023, 42.023, 64.146, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 19.3

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Complex Formed Between Phospholipase A2 and A Hexapeptide Fragment of Amyloid Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala at 1.2 A Resolution (pdb code 3jql). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Complex Formed Between Phospholipase A2 and A Hexapeptide Fragment of Amyloid Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala at 1.2 A Resolution, PDB code: 3jql:

Calcium binding site 1 out of 1 in 3jql

Go back to Calcium Binding Sites List in 3jql
Calcium binding site 1 out of 1 in the Crystal Structure of the Complex Formed Between Phospholipase A2 and A Hexapeptide Fragment of Amyloid Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala at 1.2 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Complex Formed Between Phospholipase A2 and A Hexapeptide Fragment of Amyloid Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala at 1.2 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca121

b:23.3
occ:1.00
 OD2 A:ASP49 2.2 22.2 1.0
OD1 A:ASP49 2.4 20.4 1.0
O A:GLY32 2.4 22.3 1.0
O A:TYR28 2.6 15.0 1.0
CG A:ASP49 2.6 18.8 1.0
O A:GLY30 2.7 20.2 1.0
O A:HOH222 2.8 44.6 1.0
NZ B:LYS1 3.2 56.7 1.0
C A:GLY32 3.6 22.6 1.0
C A:TYR28 3.7 15.1 1.0
C A:GLY30 3.8 20.1 1.0
N A:GLY30 4.0 17.1 1.0
O A:HOH262 4.0 50.5 1.0
O A:HOH172 4.1 22.0 1.0
CB A:ASP49 4.2 16.0 1.0
CA A:TYR28 4.2 15.0 1.0
O A:HOH223 4.3 28.2 1.0
CA A:GLY33 4.3 22.4 1.0
N A:GLY33 4.4 22.3 1.0
C A:LYS31 4.5 23.1 1.0
CD2 B:LEU2 4.5 57.4 1.0
O A:LYS31 4.5 23.8 1.0
CA A:GLY30 4.5 18.8 1.0
N A:GLY32 4.5 22.8 1.0
CA A:GLY32 4.7 22.7 1.0
CE B:LYS1 4.7 56.8 1.0
CB A:TYR28 4.7 15.5 1.0
N A:CYS29 4.8 14.8 1.0
N A:LYS31 4.8 21.6 1.0
C A:CYS29 4.9 16.3 1.0
CA A:CYS29 5.0 15.5 1.0

Reference:

Z.Mirza, G.Vikram, N.Singh, M.Sinha, S.Sharma, A.Srinivasan, P.Kaur, T.P.Singh. Crystal Structure of the Complex Formed Between Phospholipase A2 and A Hexapeptide Fragment of Amyloid Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala at 1.2 A Resolution To Be Published.
Page generated: Sat Jul 13 11:50:49 2024

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