Atomistry » Calcium » PDB 3iti-3k3w » 3jtc
Atomistry »
  Calcium »
    PDB 3iti-3k3w »
      3jtc »

Calcium in PDB 3jtc: Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins

Enzymatic activity of Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins

All present enzymatic activity of Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins:
3.4.21.69;

Protein crystallography data

The structure of Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins, PDB code: 3jtc was solved by S.P.Bajaj, K.Vadivel, S.Agah, D.Cascio, S.Krishnaswamy, C.Esmon, K.Padmanabhan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.22 / 1.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 59.220, 62.360, 71.030, 90.00, 101.81, 90.00
R / Rfree (%) 19.1 / 22.6

Other elements in 3jtc:

The structure of Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins (pdb code 3jtc). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 10 binding sites of Calcium where determined in the Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins, PDB code: 3jtc:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Calcium binding site 1 out of 10 in 3jtc

Go back to Calcium Binding Sites List in 3jtc
Calcium binding site 1 out of 10 in the Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca35

b:14.4
occ:1.00
OE12 C:CGU7 2.3 13.4 1.0
O C:HOH47 2.3 14.3 1.0
OE2 A:GLU86 2.3 17.0 1.0
OE11 C:CGU26 2.4 15.0 1.0
OE22 C:CGU7 2.4 17.2 1.0
OE22 C:CGU29 2.5 15.1 1.0
OE21 C:CGU29 2.6 14.0 1.0
CD2 C:CGU29 2.9 15.0 1.0
CD1 C:CGU7 3.2 14.0 1.0
CD A:GLU86 3.2 16.1 1.0
CD1 C:CGU26 3.3 15.3 1.0
CD2 C:CGU7 3.5 13.9 1.0
OE12 C:CGU26 3.5 12.6 1.0
OE1 A:GLU86 3.6 14.8 1.0
CG C:CGU7 3.8 12.7 1.0
CA C:CA36 3.9 15.7 1.0
O C:HOH70 4.0 21.1 1.0
O A:HOH608 4.0 21.1 1.0
MG C:MG34 4.0 15.8 1.0
OE11 C:CGU7 4.2 15.1 1.0
O C:HOH75 4.2 21.0 1.0
OE22 C:CGU25 4.3 16.5 1.0
CB C:CGU7 4.3 12.9 1.0
CG C:CGU29 4.3 15.4 1.0
CG A:GLU86 4.4 14.9 1.0
OE21 C:CGU7 4.5 16.7 1.0
O C:HOH56 4.6 18.4 1.0
CG C:CGU26 4.7 14.7 1.0
ND2 C:ASN2 4.7 17.3 1.0
OE11 C:CGU29 4.8 17.2 1.0
OD1 C:ASN2 4.8 14.9 1.0
CD2 C:CGU25 4.8 17.3 1.0
CD1 C:CGU29 4.9 16.5 1.0
CG C:CGU25 4.9 15.9 1.0

Calcium binding site 2 out of 10 in 3jtc

Go back to Calcium Binding Sites List in 3jtc
Calcium binding site 2 out of 10 in the Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca36

b:15.7
occ:1.00
O C:HOH74 2.3 14.3 1.0
OE12 C:CGU26 2.4 12.6 1.0
O C:HOH56 2.4 18.4 1.0
OE12 C:CGU7 2.5 13.4 1.0
O C:HOH57 2.5 17.8 1.0
OE21 C:CGU29 2.6 14.0 1.0
OE11 C:CGU16 2.6 14.7 1.0
OE11 C:CGU7 2.7 15.1 1.0
CD1 C:CGU7 2.9 14.0 1.0
CD1 C:CGU16 3.5 14.6 1.0
OE12 C:CGU16 3.5 15.3 1.0
CD1 C:CGU26 3.7 15.3 1.0
CA C:CA37 3.7 15.1 1.0
CD2 C:CGU29 3.7 15.0 1.0
CA C:CA35 3.9 14.4 1.0
OE11 C:CGU26 4.0 15.0 1.0
CB C:CGU29 4.2 15.4 1.0
O A:HOH608 4.4 21.1 1.0
CB C:SER11 4.4 18.0 1.0
CG C:CGU7 4.4 12.7 1.0
OE11 C:CGU6 4.5 20.0 1.0
CA C:SER11 4.6 16.0 1.0
CG C:CGU29 4.6 15.4 1.0
CA C:CGU26 4.7 14.8 1.0
CG C:CGU26 4.7 14.7 1.0
O C:CGU26 4.7 15.3 1.0
OE22 C:CGU29 4.7 15.1 1.0
CB C:CGU26 4.8 14.0 1.0
CG C:CGU16 4.9 18.6 1.0
OD1 C:ASN2 4.9 14.9 1.0
OE22 C:CGU26 4.9 17.0 1.0
CB C:CGU7 5.0 12.9 1.0

Calcium binding site 3 out of 10 in 3jtc

Go back to Calcium Binding Sites List in 3jtc
Calcium binding site 3 out of 10 in the Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca37

b:15.1
occ:1.00
OD1 C:ASN2 2.3 14.9 1.0
OE11 C:CGU7 2.3 15.1 1.0
OE21 C:CGU16 2.4 16.4 1.0
OE22 C:CGU26 2.4 17.0 1.0
OE11 C:CGU16 2.5 14.7 1.0
OE12 C:CGU6 2.6 15.6 1.0
OE12 C:CGU26 2.6 12.6 1.0
O C:ALA1 3.0 16.9 1.0
CD2 C:CGU16 3.2 16.1 1.0
CD1 C:CGU7 3.3 14.0 1.0
OE11 C:CGU6 3.3 20.0 1.0
CD1 C:CGU6 3.3 17.9 1.0
CD1 C:CGU26 3.4 15.3 1.0
CD1 C:CGU16 3.5 14.6 1.0
CG C:ASN2 3.5 16.7 1.0
CD2 C:CGU26 3.6 19.2 1.0
CA C:CA36 3.7 15.7 1.0
C C:ALA1 3.7 16.2 1.0
CA C:CA38 3.8 18.1 1.0
CG C:CGU16 3.9 18.6 1.0
OE22 C:CGU16 4.0 17.5 1.0
CG C:CGU26 4.1 14.7 1.0
CG C:CGU7 4.1 12.7 1.0
OE12 C:CGU7 4.2 13.4 1.0
N C:ALA1 4.2 16.5 1.0
CA C:ASN2 4.2 17.4 1.0
OE11 C:CGU26 4.3 15.0 1.0
N C:ASN2 4.3 17.5 1.0
O C:HOH57 4.3 17.8 1.0
CB C:ASN2 4.4 16.2 1.0
ND2 C:ASN2 4.4 17.3 1.0
CB C:CGU16 4.5 14.3 1.0
OE21 C:CGU26 4.5 17.0 1.0
CA C:ALA1 4.6 16.8 1.0
OE12 C:CGU16 4.6 15.3 1.0
CB C:CGU26 4.7 14.0 1.0
CG C:CGU6 4.8 15.6 1.0
CD2 C:CGU7 4.8 13.9 1.0
OE21 C:CGU20 4.9 18.2 1.0

Calcium binding site 4 out of 10 in 3jtc

Go back to Calcium Binding Sites List in 3jtc
Calcium binding site 4 out of 10 in the Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca38

b:18.1
occ:1.00
OE22 C:CGU6 2.3 17.8 1.0
OE21 C:CGU20 2.4 18.2 1.0
O C:ALA1 2.4 16.9 1.0
OE21 C:CGU16 2.5 16.4 1.0
O C:HOH59 2.5 20.8 1.0
OE12 C:CGU6 2.5 15.6 1.0
OE22 C:CGU16 2.5 17.5 1.0
OE22 C:CGU20 2.6 19.4 1.0
CD2 C:CGU20 2.8 22.6 1.0
CD2 C:CGU16 2.9 16.1 1.0
CD1 C:CGU6 3.2 17.9 1.0
CD2 C:CGU6 3.4 18.8 1.0
C C:ALA1 3.5 16.2 1.0
CA C:CA37 3.8 15.1 1.0
CG C:CGU6 3.8 15.6 1.0
OE11 C:CGU6 3.8 20.0 1.0
N C:ALA1 4.1 16.5 1.0
O C:HOH80 4.1 26.6 1.0
CA C:ALA1 4.3 16.8 1.0
N C:ASN2 4.4 17.5 1.0
CG C:CGU20 4.4 19.8 1.0
CA C:ASN2 4.4 17.4 1.0
CG C:CGU16 4.4 18.6 1.0
OE21 C:CGU6 4.5 18.0 1.0
CA C:CA39 4.5 33.3 1.0
O C:HOH63 4.6 37.9 1.0
O C:ARG15 4.6 18.5 1.0
NE C:ARG15 4.7 21.3 1.0
CB C:CGU6 4.7 15.6 1.0
CB C:ALA1 4.7 18.0 1.0
CA C:CGU16 4.8 17.7 1.0
OE22 C:CGU26 4.9 17.0 1.0
N C:SER3 4.9 17.4 1.0
OE11 C:CGU16 4.9 14.7 1.0
OG C:SER3 4.9 20.9 1.0
CG C:ARG15 5.0 25.1 1.0
OD1 C:ASN2 5.0 14.9 1.0
CB C:CGU16 5.0 14.3 1.0

Calcium binding site 5 out of 10 in 3jtc

Go back to Calcium Binding Sites List in 3jtc
Calcium binding site 5 out of 10 in the Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca39

b:33.3
occ:1.00
O C:HOH66 2.0 33.4 1.0
O C:HOH80 2.2 26.6 1.0
O C:HOH79 2.2 24.9 1.0
OE22 C:CGU20 2.2 19.4 1.0
O C:HOH63 2.3 37.9 1.0
OE11 C:CGU20 2.5 29.9 1.0
CD2 C:CGU20 3.2 22.6 1.0
CD1 C:CGU20 3.3 23.1 1.0
CG C:CGU20 3.5 19.8 1.0
OE22 C:CGU6 4.3 17.8 1.0
OE21 C:CGU20 4.3 18.2 1.0
O C:ARG15 4.3 18.5 1.0
O C:HOH59 4.4 20.8 1.0
CA C:CA38 4.5 18.1 1.0
OE12 C:CGU20 4.5 25.3 1.0
OE12 C:CGU19 4.5 27.6 1.0
CG C:ARG15 4.5 25.1 1.0

Calcium binding site 6 out of 10 in 3jtc

Go back to Calcium Binding Sites List in 3jtc
Calcium binding site 6 out of 10 in the Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca35

b:19.5
occ:1.00
OE2 B:GLU86 2.3 22.0 1.0
O D:HOH54 2.3 22.5 1.0
OE22 D:CGU7 2.3 19.8 1.0
OE11 D:CGU26 2.4 19.9 1.0
OE12 D:CGU7 2.4 19.9 1.0
OE22 D:CGU29 2.5 17.3 1.0
OE21 D:CGU29 2.5 21.9 1.0
CD2 D:CGU29 2.8 14.1 1.0
CD B:GLU86 3.2 20.6 1.0
CD1 D:CGU26 3.3 17.6 1.0
CD1 D:CGU7 3.3 20.0 1.0
CD2 D:CGU7 3.4 20.5 1.0
OE12 D:CGU26 3.4 18.8 1.0
OE1 B:GLU86 3.6 20.3 1.0
CG D:CGU7 3.8 18.7 1.0
CA D:CA36 3.8 19.3 1.0
O B:HOH666 4.1 29.7 1.0
MG D:MG34 4.1 21.9 1.0
O D:HOH49 4.1 25.9 1.0
OE11 D:CGU7 4.2 20.7 1.0
O D:HOH76 4.2 29.6 1.0
CB D:CGU7 4.3 21.2 1.0
CG D:CGU29 4.3 19.9 1.0
OE22 D:CGU25 4.3 21.2 1.0
CG B:GLU86 4.4 21.4 1.0
OE21 D:CGU7 4.4 22.6 1.0
O D:HOH56 4.6 20.0 1.0
ND2 D:ASN2 4.7 23.0 1.0
CG D:CGU26 4.7 17.1 1.0
OD1 D:ASN2 4.8 19.0 1.0
CD2 D:CGU25 4.9 19.6 1.0
OE11 D:CGU29 4.9 20.1 1.0
CG D:CGU25 4.9 19.5 1.0
CD1 D:CGU29 4.9 20.7 1.0

Calcium binding site 7 out of 10 in 3jtc

Go back to Calcium Binding Sites List in 3jtc
Calcium binding site 7 out of 10 in the Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca36

b:19.3
occ:1.00
OE12 D:CGU26 2.4 18.8 1.0
O D:HOH57 2.4 19.5 1.0
OE12 D:CGU7 2.4 19.9 1.0
OE21 D:CGU29 2.4 21.9 1.0
OE11 D:CGU16 2.5 21.1 1.0
O D:HOH56 2.5 20.0 1.0
O D:HOH60 2.5 19.9 1.0
OE11 D:CGU7 2.6 20.7 1.0
CD1 D:CGU7 2.8 20.0 1.0
CD1 D:CGU16 3.5 20.7 1.0
OE12 D:CGU16 3.6 20.0 1.0
CD2 D:CGU29 3.6 14.1 1.0
CD1 D:CGU26 3.6 17.6 1.0
CA D:CA37 3.7 18.7 1.0
CA D:CA35 3.8 19.5 1.0
OE11 D:CGU26 4.0 19.9 1.0
CB D:CGU29 4.3 19.3 1.0
CG D:CGU7 4.4 18.7 1.0
OE11 D:CGU6 4.5 24.9 1.0
CB D:SER11 4.5 22.9 1.0
CG D:CGU29 4.5 19.9 1.0
O B:HOH666 4.6 29.7 1.0
OE22 D:CGU29 4.6 17.3 1.0
CA D:SER11 4.7 21.2 1.0
CA D:CGU26 4.7 17.3 1.0
CB D:CGU26 4.7 18.0 1.0
O D:CGU26 4.7 21.4 1.0
CG D:CGU26 4.7 17.1 1.0
CG D:CGU16 4.9 20.1 1.0
CB D:CGU7 4.9 21.2 1.0
OD1 D:ASN2 4.9 19.0 1.0
OE2 B:GLU86 4.9 22.0 1.0
OE22 D:CGU26 5.0 18.8 1.0

Calcium binding site 8 out of 10 in 3jtc

Go back to Calcium Binding Sites List in 3jtc
Calcium binding site 8 out of 10 in the Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca37

b:18.7
occ:1.00
OE11 D:CGU7 2.2 20.7 1.0
OD1 D:ASN2 2.3 19.0 1.0
OE21 D:CGU16 2.3 19.2 1.0
OE22 D:CGU26 2.4 18.8 1.0
OE11 D:CGU16 2.5 21.1 1.0
OE12 D:CGU6 2.5 20.9 1.0
OE12 D:CGU26 2.7 18.8 1.0
O D:ALA1 2.8 21.2 1.0
CD1 D:CGU7 3.2 20.0 1.0
CD2 D:CGU16 3.2 18.4 1.0
CD1 D:CGU6 3.3 25.3 1.0
CD1 D:CGU26 3.4 17.6 1.0
CD1 D:CGU16 3.4 20.7 1.0
OE11 D:CGU6 3.4 24.9 1.0
CG D:ASN2 3.5 22.9 1.0
CD2 D:CGU26 3.6 19.0 1.0
C D:ALA1 3.6 19.5 1.0
CA D:CA36 3.7 19.3 1.0
CA D:CA38 3.7 20.7 1.0
CG D:CGU16 3.9 20.1 1.0
CG D:CGU26 4.0 17.1 1.0
OE12 D:CGU7 4.1 19.9 1.0
CG D:CGU7 4.1 18.7 1.0
OE22 D:CGU16 4.2 20.8 1.0
CA D:ASN2 4.2 20.3 1.0
N D:ALA1 4.2 19.4 1.0
N D:ASN2 4.3 19.9 1.0
OE11 D:CGU26 4.3 19.9 1.0
ND2 D:ASN2 4.3 23.0 1.0
O D:HOH60 4.4 19.9 1.0
CB D:ASN2 4.4 19.8 1.0
CA D:ALA1 4.5 18.3 1.0
CB D:CGU16 4.6 19.1 1.0
OE21 D:CGU26 4.6 20.6 1.0
OE12 D:CGU16 4.6 20.0 1.0
CB D:CGU26 4.6 18.0 1.0
CG D:CGU6 4.8 22.7 1.0
CD2 D:CGU7 4.8 20.5 1.0
OE21 D:CGU20 4.8 22.9 1.0

Calcium binding site 9 out of 10 in 3jtc

Go back to Calcium Binding Sites List in 3jtc
Calcium binding site 9 out of 10 in the Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 9 of Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca38

b:20.7
occ:1.00
O D:ALA1 2.3 21.2 1.0
OE22 D:CGU6 2.4 23.2 1.0
O D:HOH77 2.4 22.8 1.0
OE21 D:CGU20 2.4 22.9 1.0
OE21 D:CGU16 2.4 19.2 1.0
OE12 D:CGU6 2.5 20.9 1.0
OE22 D:CGU16 2.5 20.8 1.0
CD2 D:CGU16 2.8 18.4 1.0
OE22 D:CGU20 2.8 22.2 1.0
CD2 D:CGU20 2.8 19.4 1.0
CD1 D:CGU6 3.2 25.3 1.0
C D:ALA1 3.4 19.5 1.0
CD2 D:CGU6 3.5 27.9 1.0
CA D:CA37 3.7 18.7 1.0
CG D:CGU6 3.8 22.7 1.0
OE11 D:CGU6 3.9 24.9 1.0
O D:HOH75 4.0 37.3 1.0
N D:ALA1 4.1 19.4 1.0
O D:ARG15 4.2 25.3 1.0
CG D:CGU16 4.3 20.1 1.0
CA D:ALA1 4.3 18.3 1.0
N D:ASN2 4.3 19.9 1.0
CG D:CGU20 4.4 21.5 1.0
CA D:ASN2 4.4 20.3 1.0
O D:HOH70 4.5 28.5 1.0
OE21 D:CGU6 4.5 27.1 1.0
CA D:CA39 4.6 34.3 1.0
CB D:CGU6 4.7 21.1 1.0
NE D:ARG15 4.7 25.1 1.0
O D:HOH78 4.7 49.7 1.0
CA D:CGU16 4.8 20.7 1.0
N D:SER3 4.8 21.5 1.0
OE22 D:CGU26 4.8 18.8 1.0
CB D:ALA1 4.8 21.8 1.0
OD1 D:ASN2 4.9 19.0 1.0
OE11 D:CGU16 4.9 21.1 1.0
CB D:CGU16 5.0 19.1 1.0

Calcium binding site 10 out of 10 in 3jtc

Go back to Calcium Binding Sites List in 3jtc
Calcium binding site 10 out of 10 in the Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 10 of Importance of MG2+ in the CA2+-Dependent Folding of the Gamma- Carboxyglutamic Acid Domains of Vitamin K-Dependent Clotting and Anticlotting Proteins within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca39

b:34.3
occ:1.00
O D:HOH69 1.8 24.2 0.5
OE22 D:CGU20 2.1 22.2 1.0
O D:HOH58 2.2 22.3 1.0
O D:HOH70 2.3 28.5 1.0
OE11 D:CGU20 2.3 28.9 1.0
O D:HOH75 2.4 37.3 1.0
CD1 D:CGU20 3.2 22.3 1.0
CD2 D:CGU20 3.2 19.4 1.0
CG D:CGU20 3.4 21.5 1.0
O D:ARG15 4.1 25.3 1.0
OE22 D:CGU6 4.3 23.2 1.0
OE21 D:CGU20 4.3 22.9 1.0
OE12 D:CGU20 4.4 29.1 1.0
O D:HOH77 4.5 22.8 1.0
CG D:ARG15 4.5 26.5 1.0
CA D:CA38 4.6 20.7 1.0
OE22 D:CGU19 4.7 27.3 1.0
CB D:CGU20 4.9 24.4 1.0

Reference:

K.Vadivel, S.Agah, A.S.Messer, D.Cascio, M.S.Bajaj, S.Krishnaswamy, C.T.Esmon, K.Padmanabhan, S.P.Bajaj. Structural and Functional Studies of Gamma-Carboxyglutamic Acid Domains of Factor Viia and Activated Protein C: Role of Magnesium at Physiological Calcium. J.Mol.Biol. V. 425 1961 2013.
ISSN: ISSN 0022-2836
PubMed: 23454357
DOI: 10.1016/J.JMB.2013.02.017
Page generated: Sat Dec 12 04:16:28 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy