Calcium in PDB 3l4m: Crystal Structure of the Maug/Pre-Methylamine Dehydrogenase Complex.

All present enzymatic activity of Crystal Structure of the Maug/Pre-Methylamine Dehydrogenase Complex.:
1.4.99.3;

The structure of Crystal Structure of the Maug/Pre-Methylamine Dehydrogenase Complex., PDB code: 3l4m was solved by L.M.R.Jensen, C.M.Wilmot, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.49 / 2.02
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	55.527, 83.524, 107.782, 109.94, 91.54, 105.78
R / Rfree (%)	13.5 / 18.9

The structure of Crystal Structure of the Maug/Pre-Methylamine Dehydrogenase Complex. also contains other interesting chemical elements:

Iron

(Fe)

4 atoms

The binding sites of Calcium atom in the Crystal Structure of the Maug/Pre-Methylamine Dehydrogenase Complex. (pdb code 3l4m). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of the Maug/Pre-Methylamine Dehydrogenase Complex., PDB code: 3l4m:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Crystal Structure of the Maug/Pre-Methylamine Dehydrogenase Complex.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Maug/Pre-Methylamine Dehydrogenase Complex. within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca400 b:9.3 occ:1.00 O A:THR275 2.3 9.8 1.0 O A:HOH395 2.4 6.0 1.0 O A:PRO277 2.4 9.0 1.0 OD1 A:ASN66 2.4 9.9 1.0 O A:HOH386 2.5 10.3 1.0 O A:HOH378 2.5 5.3 1.0 O A:HOH377 2.6 9.3 1.0 CG A:ASN66 3.5 8.6 1.0 C A:THR275 3.6 9.3 1.0 C A:PRO277 3.7 8.9 1.0 ND2 A:ASN66 4.0 7.7 1.0 C A:GLY276 4.1 7.9 1.0 O A:HOH423 4.3 12.1 1.0 N A:PRO277 4.3 8.0 1.0 CA A:GLY276 4.3 6.9 1.0 N A:GLY276 4.4 7.7 1.0 CA A:TYR278 4.4 10.2 1.0 CB A:THR275 4.4 10.8 1.0 O A:GLY276 4.5 7.7 1.0 N A:TYR278 4.5 9.5 1.0 OG1 A:THR275 4.5 10.8 1.0 O A:THR67 4.5 8.7 1.0 O A:HOH398 4.5 9.6 1.0 O1A A:HEC600 4.6 11.6 1.0 CA A:THR275 4.6 9.8 1.0 CA A:PRO277 4.6 7.9 1.0 O2A A:HEC600 4.7 8.6 1.0 CD2 A:TYR278 4.7 11.1 1.0 CB A:ASN66 4.7 9.0 1.0 CD A:PRO277 4.9 7.2 1.0 O A:HOH456 4.9 19.0 1.0

Calcium binding site 2 out of 2 in the Crystal Structure of the Maug/Pre-Methylamine Dehydrogenase Complex.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of the Maug/Pre-Methylamine Dehydrogenase Complex. within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca400 b:10.5 occ:1.00 O B:HOH383 2.3 9.6 1.0 O B:PRO277 2.4 9.7 1.0 O B:THR275 2.4 12.4 1.0 O B:HOH399 2.5 5.8 1.0 OD1 B:ASN66 2.5 8.4 1.0 O B:HOH443 2.5 15.9 1.0 O B:HOH417 2.5 9.1 1.0 CG B:ASN66 3.5 11.0 1.0 C B:PRO277 3.6 9.4 1.0 C B:THR275 3.6 11.0 1.0 ND2 B:ASN66 4.0 6.9 1.0 O B:HOH439 4.1 15.5 1.0 C B:GLY276 4.1 11.5 1.0 CA B:GLY276 4.2 12.0 1.0 N B:PRO277 4.3 10.4 1.0 OG1 B:THR275 4.3 13.6 1.0 O B:THR67 4.4 11.3 1.0 CB B:THR275 4.4 10.7 1.0 N B:GLY276 4.4 11.7 1.0 O B:GLY276 4.4 11.5 1.0 N B:TYR278 4.4 9.2 1.0 CA B:TYR278 4.5 10.3 1.0 O1A B:HEC600 4.6 11.6 1.0 CA B:PRO277 4.6 9.3 1.0 O2A B:HEC600 4.6 9.6 1.0 CA B:THR275 4.7 11.5 1.0 O B:HOH475 4.7 14.6 1.0 O B:HOH423 4.8 21.2 1.0 CB B:ASN66 4.8 9.2 1.0 CD2 B:TYR278 4.8 11.9 1.0 CD B:PRO277 4.9 10.1 1.0

L.M.Jensen, R.Sanishvili, V.L.Davidson, C.M.Wilmot. In Crystallo Posttranslational Modification Within A Maug/Pre-Methylamine Dehydrogenase Complex. Science V. 327 1392 2010.
ISSN: ISSN 0036-8075
PubMed: 20223990
DOI: 10.1126/SCIENCE.1182492