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Calcium in PDB 3lvt: The Crystal Structure of A Protein in the Glycosyl Hydrolase Family 38 From Enterococcus Faecalis to 2.55A

Protein crystallography data

The structure of The Crystal Structure of A Protein in the Glycosyl Hydrolase Family 38 From Enterococcus Faecalis to 2.55A, PDB code: 3lvt was solved by A.J.Stein, T.A.Binkowski, A.Weger, M.Borovilos, S.Moy, A.Joachimiak, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.04 / 2.55
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 132.728, 134.947, 106.329, 90.00, 90.00, 90.00
R / Rfree (%) 22.2 / 28.2

Calcium Binding Sites:

The binding sites of Calcium atom in the The Crystal Structure of A Protein in the Glycosyl Hydrolase Family 38 From Enterococcus Faecalis to 2.55A (pdb code 3lvt). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the The Crystal Structure of A Protein in the Glycosyl Hydrolase Family 38 From Enterococcus Faecalis to 2.55A, PDB code: 3lvt:

Calcium binding site 1 out of 1 in 3lvt

Go back to Calcium Binding Sites List in 3lvt
Calcium binding site 1 out of 1 in the The Crystal Structure of A Protein in the Glycosyl Hydrolase Family 38 From Enterococcus Faecalis to 2.55A


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Crystal Structure of A Protein in the Glycosyl Hydrolase Family 38 From Enterococcus Faecalis to 2.55A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca897

b:61.2
occ:1.00
O A:PHE250 2.4 61.7 1.0
O A:TYR253 2.4 59.4 1.0
O A:ASN247 3.0 59.3 1.0
OD1 A:ASN247 3.3 60.3 1.0
C A:PHE250 3.6 61.4 1.0
C A:TYR253 3.6 59.6 1.0
C A:ASN247 3.8 59.4 1.0
CA A:ASN247 3.8 59.0 1.0
CG A:ASN247 4.1 60.6 1.0
CA A:GLU254 4.2 60.9 1.0
CB A:ASN247 4.2 59.4 1.0
N A:GLU254 4.3 60.1 1.0
NZ A:LYS3 4.4 59.7 1.0
CA A:PRO251 4.4 61.2 1.0
N A:PRO251 4.4 61.4 1.0
CA A:PHE250 4.6 61.5 1.0
N A:TYR253 4.6 59.9 1.0
C A:PRO251 4.6 61.2 1.0
O A:PRO251 4.6 61.3 1.0
CA A:TYR253 4.7 59.5 1.0
N A:PHE250 4.7 61.1 1.0
CE A:LYS3 4.8 58.3 1.0
O A:ALA246 4.9 58.2 1.0
CB A:PHE250 4.9 61.8 1.0

Reference:

A.J.Stein, T.A.Binkowski, A.Weger, M.Borovilos, S.Moy, A.Joachimiak. The Crystal Structure of A Protein in the Glycosyl Hydrolase Family 38 From Enterococcus Faecalis to 2.55A To Be Published.
Page generated: Sat Dec 12 04:19:57 2020

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