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Calcium in PDB 3mkn: Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor
Enzymatic activity of Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor
All present enzymatic activity of Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor:
3.2.2.8;
3.2.2.8;
Protein crystallography data
The structure of Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor, PDB code: 3mkn
was solved by
G.Garau,
A.Fornili,
B.Giabbai,
M.Degano,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 44.97 / 2.00 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 84.851, 86.446, 97.817, 90.00, 98.86, 90.00 |
| R / Rfree (%) | 17.4 / 19.6 |
Calcium Binding Sites:
The binding sites of Calcium atom in the Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor
(pdb code 3mkn). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor, PDB code: 3mkn:
Jump to Calcium binding site number: 1; 2; 3; 4;
In total 4 binding sites of Calcium where determined in the Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor, PDB code: 3mkn:
Jump to Calcium binding site number: 1; 2; 3; 4;
Calcium binding site 1 out of 4 in 3mkn
Go back to
Calcium Binding Sites List in 3mkn
Calcium binding site 1 out
of 4 in the Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor within 5.0Å range:
|
Calcium binding site 2 out of 4 in 3mkn
Go back to
Calcium Binding Sites List in 3mkn
Calcium binding site 2 out
of 4 in the Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor within 5.0Å range:
|
Calcium binding site 3 out of 4 in 3mkn
Go back to
Calcium Binding Sites List in 3mkn
Calcium binding site 3 out
of 4 in the Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor within 5.0Å range:
|
Calcium binding site 4 out of 4 in 3mkn
Go back to
Calcium Binding Sites List in 3mkn
Calcium binding site 4 out
of 4 in the Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Crystal Structure of the E. Coli Pyrimidine Nucleosidase Yeik Bound to A Competitive Inhibitor within 5.0Å range:
|
Reference:
A.Fornili,
B.Giabbai,
G.Garau,
M.Degano.
Energy Landscapes Associated with Macromolecular Conformational Changes From Endpoint Structures J.Am.Chem.Soc. V. 132 17570 2010.
ISSN: ISSN 0002-7863
PubMed: 21082835
DOI: 10.1021/JA107640U
Page generated: Tue Jul 8 14:37:00 2025
ISSN: ISSN 0002-7863
PubMed: 21082835
DOI: 10.1021/JA107640U
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