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Calcium in PDB 3n01: Crystal Structure of An Abridged Form of the Mature Ectodomain of the Human Receptor-Type Protein Tyrosine Phosphatase ICA512/Ia-2 at pH 8.5

Protein crystallography data

The structure of Crystal Structure of An Abridged Form of the Mature Ectodomain of the Human Receptor-Type Protein Tyrosine Phosphatase ICA512/Ia-2 at pH 8.5, PDB code: 3n01 was solved by M.E.Primo, J.Jakoncic, E.Poskus, M.R.Ermacora, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 31.493, 66.681, 72.999, 90.00, 90.00, 90.00
R / Rfree (%) 17.3 / 21.3

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of An Abridged Form of the Mature Ectodomain of the Human Receptor-Type Protein Tyrosine Phosphatase ICA512/Ia-2 at pH 8.5 (pdb code 3n01). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of An Abridged Form of the Mature Ectodomain of the Human Receptor-Type Protein Tyrosine Phosphatase ICA512/Ia-2 at pH 8.5, PDB code: 3n01:

Calcium binding site 1 out of 1 in 3n01

Go back to Calcium Binding Sites List in 3n01
Calcium binding site 1 out of 1 in the Crystal Structure of An Abridged Form of the Mature Ectodomain of the Human Receptor-Type Protein Tyrosine Phosphatase ICA512/Ia-2 at pH 8.5


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of An Abridged Form of the Mature Ectodomain of the Human Receptor-Type Protein Tyrosine Phosphatase ICA512/Ia-2 at pH 8.5 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca600

b:10.4
occ:1.00
OE1 B:GLN548 2.3 10.5 1.0
O B:HOH807 2.4 15.1 1.0
O B:HOH708 2.4 14.3 1.0
OE1 B:GLU542 2.4 11.7 1.0
OE2 B:GLU542 2.4 9.9 1.0
CD B:GLU542 2.8 9.4 1.0
CD B:GLN548 3.4 10.4 1.0
NE2 B:GLN548 3.9 12.8 1.0
O B:HOH818 4.2 15.9 1.0
CG B:GLU542 4.4 9.3 1.0
O B:HOH810 4.5 14.9 1.0
CG B:GLN548 4.5 11.7 1.0
NE2 A:GLN556 4.6 19.1 0.4
O A:HOH730 4.6 28.7 1.0
CB B:GLN548 4.7 11.0 1.0
O B:ILE549 4.7 11.8 1.0
N B:ILE549 4.8 10.0 1.0
CA B:GLN548 4.9 9.1 1.0
CG A:GLN556 4.9 20.3 0.6

Reference:

M.E.Primo, J.Jakoncic, E.Poskus, M.R.Ermacora. Receptor-Type Protein-Tyrosine Phosphatase Ia-2-ICA512 To Be Published.
Page generated: Sat Jul 13 14:48:43 2024

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