Calcium in PDB 3nng: Crystal Structure of the F5/8 Type C Domain of Q5LFR2_BACFN Protein From Bacteroides Fragilis. Northeast Structural Genomics Consortium Target BFR258E

The structure of Crystal Structure of the F5/8 Type C Domain of Q5LFR2_BACFN Protein From Bacteroides Fragilis. Northeast Structural Genomics Consortium Target BFR258E, PDB code: 3nng was solved by S.Vorobiev, M.Su, F.Dimaio, D.Baker, J.Seetharaman, J.Janjua, R.Xiao, C.Ciccosanti, E.L.Foote, D.Lee, J.K.Everett, R.Nair, T.B.Acton, B.Rost, G.T.Montelione, J.F.Hunt, L.Tong, Northeast Structural Genomicsconsortium (Nesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.23 / 2.18
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	57.208, 62.463, 72.001, 90.00, 90.00, 90.00
R / Rfree (%)	16.4 / 22.4

The binding sites of Calcium atom in the Crystal Structure of the F5/8 Type C Domain of Q5LFR2_BACFN Protein From Bacteroides Fragilis. Northeast Structural Genomics Consortium Target BFR258E (pdb code 3nng). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of the F5/8 Type C Domain of Q5LFR2_BACFN Protein From Bacteroides Fragilis. Northeast Structural Genomics Consortium Target BFR258E, PDB code: 3nng:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Crystal Structure of the F5/8 Type C Domain of Q5LFR2_BACFN Protein From Bacteroides Fragilis. Northeast Structural Genomics Consortium Target BFR258E


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the F5/8 Type C Domain of Q5LFR2_BACFN Protein From Bacteroides Fragilis. Northeast Structural Genomics Consortium Target BFR258E within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca402 b:22.9 occ:1.00 O A:GLU223 2.4 13.3 1.0 O A:LEU218 2.4 13.2 1.0 O A:ALA329 2.4 11.8 1.0 O A:THR226 2.5 20.4 1.0 OD1 A:ASP221 2.6 19.3 1.0 OE2 A:GLU330 2.7 23.4 1.0 OG1 A:THR226 2.7 20.0 1.0 C A:THR226 3.4 18.8 1.0 C A:GLU223 3.5 24.1 1.0 CG A:ASP221 3.5 21.5 1.0 C A:ALA329 3.5 16.5 1.0 C A:LEU218 3.6 18.8 1.0 CD A:GLU330 3.7 28.8 1.0 N A:GLU223 3.8 23.9 1.0 OD2 A:ASP221 3.8 17.4 1.0 CB A:THR226 3.9 17.6 1.0 CG A:GLU330 4.0 27.6 1.0 CA A:GLU223 4.0 20.1 1.0 CA A:THR226 4.0 14.1 1.0 N A:THR226 4.1 17.9 1.0 CA A:ALA329 4.2 16.9 1.0 CB A:GLU223 4.3 15.5 1.0 CA A:ALA219 4.4 16.8 1.0 CB A:ALA329 4.4 18.0 1.0 N A:THR227 4.4 19.8 1.0 N A:ALA219 4.5 17.3 1.0 N A:ASP221 4.5 17.9 1.0 C A:ALA219 4.5 18.9 1.0 CA A:LEU218 4.5 16.9 1.0 N A:ILE224 4.6 20.6 1.0 N A:GLU330 4.6 15.7 1.0 N A:GLY222 4.7 15.8 1.0 CA A:THR227 4.7 13.8 1.0 CB A:ASP221 4.8 15.7 1.0 OE1 A:GLU330 4.8 32.4 1.0 CB A:LEU218 4.8 19.1 1.0 O A:ALA219 4.8 18.8 1.0 CA A:GLU330 4.8 13.1 1.0 CA A:ILE224 4.8 21.3 1.0 C A:ILE224 4.9 24.9 1.0 N A:ILE220 4.9 19.0 1.0 CG A:GLU223 4.9 21.2 1.0 C A:GLY222 4.9 24.7 1.0 CA A:ASP221 5.0 11.9 1.0

Calcium binding site 2 out of 2 in the Crystal Structure of the F5/8 Type C Domain of Q5LFR2_BACFN Protein From Bacteroides Fragilis. Northeast Structural Genomics Consortium Target BFR258E


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of the F5/8 Type C Domain of Q5LFR2_BACFN Protein From Bacteroides Fragilis. Northeast Structural Genomics Consortium Target BFR258E within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca401 b:37.7 occ:1.00 O B:LEU218 2.4 28.6 1.0 O B:ALA329 2.4 32.7 1.0 O B:GLU223 2.5 38.8 1.0 OD1 B:ASP221 2.7 29.4 1.0 OG1 B:THR226 2.7 37.6 1.0 OE2 B:GLU330 2.7 35.7 1.0 O B:THR226 2.9 29.5 1.0 C B:GLU223 3.4 39.8 1.0 C B:ALA329 3.5 28.0 1.0 CG B:ASP221 3.6 34.0 1.0 C B:THR226 3.6 32.3 1.0 C B:LEU218 3.6 30.8 1.0 CD B:GLU330 3.7 43.8 1.0 N B:GLU223 3.9 38.3 1.0 OD2 B:ASP221 3.9 31.5 1.0 CB B:THR226 3.9 30.6 1.0 CG B:GLU330 4.0 30.3 1.0 CA B:GLU223 4.1 41.6 1.0 CA B:ALA329 4.1 28.3 1.0 CA B:THR226 4.1 31.5 1.0 CA B:ALA219 4.2 24.4 1.0 N B:THR226 4.3 38.4 1.0 N B:THR227 4.4 27.5 1.0 C B:ALA219 4.4 22.1 1.0 N B:ALA219 4.4 26.5 1.0 N B:ILE224 4.4 48.5 1.0 CB B:GLU223 4.4 46.5 1.0 N B:ASP221 4.4 35.4 1.0 CB B:ALA329 4.5 28.0 1.0 N B:GLU330 4.5 29.3 1.0 CA B:THR227 4.7 24.0 1.0 CA B:ILE224 4.7 48.9 1.0 CA B:LEU218 4.7 32.4 1.0 O B:ALA219 4.7 25.3 1.0 N B:GLY222 4.7 32.8 1.0 CA B:GLU330 4.8 27.2 1.0 CB B:ASP221 4.8 35.7 1.0 N B:ILE220 4.8 26.4 1.0 C B:ILE224 4.8 49.7 1.0 OE1 B:GLU330 4.8 48.8 1.0 C B:GLY222 4.9 40.3 1.0 CA B:ASP221 4.9 41.6 1.0 C B:ASP221 5.0 40.1 1.0 CB B:LEU218 5.0 31.3 1.0 O B:ILE224 5.0 48.7 1.0

S.Vorobiev, M.Su, F.Dimaio, D.Baker, J.Seetharaman, J.Janjua, R.Xiao, C.Ciccosanti, E.L.Foote, D.Lee, J.K.Everett, R.Nair, T.B.Acton, B.Rost, G.T.Montelione, J.F.Hunt, L.Tong. Crystal Structure of the F5/8 Type C Domain of Q5LFR2_BACFN Protein From Bacteroides Fragilis. To Be Published.