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Calcium in PDB 3nol: Crystal Structure of Zymomonas Mobilis Glutaminyl Cyclase (Trigonal Form)

Enzymatic activity of Crystal Structure of Zymomonas Mobilis Glutaminyl Cyclase (Trigonal Form)

All present enzymatic activity of Crystal Structure of Zymomonas Mobilis Glutaminyl Cyclase (Trigonal Form):
2.3.2.5;

Protein crystallography data

The structure of Crystal Structure of Zymomonas Mobilis Glutaminyl Cyclase (Trigonal Form), PDB code: 3nol was solved by C.Parthier, D.R.Carrillo, M.T.Stubbs, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.46 / 1.70
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 61.423, 61.423, 98.800, 90.00, 90.00, 120.00
R / Rfree (%) 17.8 / 22

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Zymomonas Mobilis Glutaminyl Cyclase (Trigonal Form) (pdb code 3nol). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Zymomonas Mobilis Glutaminyl Cyclase (Trigonal Form), PDB code: 3nol:

Calcium binding site 1 out of 1 in 3nol

Go back to Calcium Binding Sites List in 3nol
Calcium binding site 1 out of 1 in the Crystal Structure of Zymomonas Mobilis Glutaminyl Cyclase (Trigonal Form)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Zymomonas Mobilis Glutaminyl Cyclase (Trigonal Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca263

b:5.8
occ:1.00
O A:PHE48 2.3 4.5 1.0
OE2 A:GLU178 2.3 6.7 1.0
O A:LEU177 2.4 4.3 1.0
O A:HOH291 2.4 6.2 1.0
O A:ILE230 2.4 4.7 1.0
OE1 A:GLU176 2.5 4.4 1.0
OE2 A:GLU176 2.5 4.5 1.0
CD A:GLU176 2.9 5.7 1.0
C A:PHE48 3.5 6.0 1.0
C A:LEU177 3.5 5.2 1.0
CD A:GLU178 3.5 8.0 1.0
C A:ILE230 3.7 6.0 1.0
CB A:GLU178 3.9 5.3 1.0
CA A:GLU178 4.2 5.5 1.0
N A:GLU178 4.3 4.4 1.0
O A:HOH307 4.3 8.1 1.0
CG A:GLU178 4.3 7.0 1.0
N A:ILE230 4.3 5.3 1.0
N A:PHE48 4.3 5.9 1.0
CA A:PHE48 4.4 5.2 1.0
CB A:PHE49 4.4 6.2 1.0
CG A:GLU176 4.4 5.5 1.0
N A:PHE49 4.4 5.4 1.0
CA A:PHE49 4.4 5.8 1.0
N A:LEU177 4.4 5.5 1.0
CA A:ILE230 4.5 5.1 1.0
OE1 A:GLU178 4.5 10.8 1.0
O A:LEU132 4.6 5.1 1.0
O A:HOH282 4.6 5.7 1.0
N A:ALA231 4.6 5.2 1.0
CA A:LEU177 4.6 4.5 1.0
CB A:ILE230 4.6 5.3 1.0
CA A:ALA231 4.7 5.8 1.0
CB A:PHE48 4.7 5.5 1.0

Reference:

D.R.Carrillo, C.Parthier, N.Janckel, J.Grandke, M.Stelter, S.Schilling, M.Boehme, P.Neumann, R.Wolf, H.U.Demuth, M.T.Stubbs, J.U.Rahfeld. Kinetic and Structural Characterization of Bacterial Glutaminyl Cyclases From Zymomonas Mobilis and Myxococcus Xanthus Biol.Chem. V. 391 1419 2010.
ISSN: ISSN 1431-6730
PubMed: 20868223
DOI: 10.1515/BC.2010.130
Page generated: Sat Jul 13 15:05:34 2024

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