Calcium in PDB 3nqn: Crystal Structure of A Protein with Unknown Function. (DR_2006) From Deinococcus Radiodurans at 1.88 A Resolution

The structure of Crystal Structure of A Protein with Unknown Function. (DR_2006) From Deinococcus Radiodurans at 1.88 A Resolution, PDB code: 3nqn was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.89 / 1.88
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	53.509, 53.509, 223.753, 90.00, 90.00, 90.00
R / Rfree (%)	19.6 / 23.8

The binding sites of Calcium atom in the Crystal Structure of A Protein with Unknown Function. (DR_2006) From Deinococcus Radiodurans at 1.88 A Resolution (pdb code 3nqn). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 3 binding sites of Calcium where determined in the Crystal Structure of A Protein with Unknown Function. (DR_2006) From Deinococcus Radiodurans at 1.88 A Resolution, PDB code: 3nqn:
Jump to Calcium binding site number: 1; 2; 3;

Calcium binding site 1 out of 3 in the Crystal Structure of A Protein with Unknown Function. (DR_2006) From Deinococcus Radiodurans at 1.88 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Protein with Unknown Function. (DR_2006) From Deinococcus Radiodurans at 1.88 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca158 b:36.1 occ:1.00 O A:HOH302 2.3 37.6 1.0 OD1 B:ASP62 2.4 31.7 1.0 O A:HOH194 2.4 31.0 1.0 O B:HOH190 2.5 38.0 1.0 OD1 A:ASP62 2.5 40.1 1.0 O A:HOH214 2.6 39.0 1.0 OD2 A:ASP62 2.6 30.1 1.0 OD2 B:ASP62 2.6 34.9 1.0 CG B:ASP62 2.8 33.8 1.0 CG A:ASP62 2.9 32.8 1.0 NH1 B:ARG87 3.9 53.6 1.0 NH1 A:ARG87 4.0 50.0 1.0 CB B:ASP62 4.4 28.9 1.0 CB A:ASP62 4.4 33.2 1.0 O A:HOH231 4.4 43.6 1.0 O A:HOH343 4.7 49.1 1.0 O B:ASP62 4.7 31.0 1.0 O A:HOH240 4.7 40.7 1.0 O A:ASP62 4.7 32.4 1.0 N B:ASP62 4.7 30.1 1.0 N A:ASP62 4.8 31.0 1.0 O B:HOH195 4.8 32.5 1.0 O B:HOH219 4.8 48.4 1.0 O A:HOH204 4.8 42.6 1.0 O B:HOH279 4.9 45.8 1.0

Calcium binding site 2 out of 3 in the Crystal Structure of A Protein with Unknown Function. (DR_2006) From Deinococcus Radiodurans at 1.88 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of A Protein with Unknown Function. (DR_2006) From Deinococcus Radiodurans at 1.88 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca159 b:36.2 occ:0.75 O B:MSE1 2.3 54.8 1.0 O B:HOH202 2.3 43.9 1.0 OE2 B:GLU140 2.4 43.9 1.0 O B:HOH184 2.4 35.8 1.0 O B:SER4 2.5 37.2 1.0 O B:HOH353 2.5 54.9 1.0 CD B:GLU140 3.4 37.6 1.0 C B:MSE1 3.4 55.9 1.0 CG B:GLU140 3.6 36.8 1.0 C B:SER4 3.7 34.8 1.0 O B:HOH176 4.0 29.9 1.0 CA B:ALA5 4.1 31.2 1.0 CA B:MSE1 4.2 59.5 1.0 O B:ILE2 4.3 49.1 1.0 N B:ALA5 4.3 31.4 1.0 O B:HOH306 4.3 59.9 1.0 CB B:ALA5 4.4 29.0 1.0 CB B:MSE1 4.4 61.1 1.0 N B:ILE2 4.5 52.5 1.0 OE1 B:GLU140 4.5 41.9 1.0 C B:ILE2 4.6 48.9 1.0 CA B:ILE2 4.6 51.2 1.0 N B:SER4 4.7 35.9 1.0 CA B:SER4 4.8 35.7 1.0

Calcium binding site 3 out of 3 in the Crystal Structure of A Protein with Unknown Function. (DR_2006) From Deinococcus Radiodurans at 1.88 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Crystal Structure of A Protein with Unknown Function. (DR_2006) From Deinococcus Radiodurans at 1.88 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca160 b:47.9 occ:1.00 O B:HOH333 2.4 54.7 1.0 O B:HOH337 2.5 59.1 1.0 O B:GLU6 2.5 32.1 1.0 O B:HOH234 2.5 40.6 1.0 O B:HOH176 2.7 29.9 1.0 C B:GLU6 3.7 33.1 1.0 OE1 B:GLN7 4.1 47.6 1.0 OE1 B:GLU140 4.2 41.9 1.0 OE1 B:GLU6 4.3 45.5 1.0 N B:GLU6 4.3 30.4 1.0 CA B:GLU6 4.5 32.8 1.0 OE2 B:GLU140 4.6 43.9 1.0 N B:GLN7 4.7 31.2 1.0 CB B:GLU6 4.7 34.7 1.0 CA B:GLN7 4.8 30.4 1.0 CD B:GLU140 4.8 37.6 1.0 CD B:GLN7 5.0 41.1 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.