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Calcium in PDB 3nur: Crystal Structure of A Putative Amidohydrolase From Staphylococcus Aureus

Protein crystallography data

The structure of Crystal Structure of A Putative Amidohydrolase From Staphylococcus Aureus, PDB code: 3nur was solved by W.Qiu, R.Lam, V.Romanov, K.Lam, M.Soloveychik, E.F.Pai, N.Y.Chirgadze, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 63.78 / 1.75
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 83.289, 99.160, 92.126, 90.00, 90.00, 90.00
R / Rfree (%) 16.9 / 19.6

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of A Putative Amidohydrolase From Staphylococcus Aureus (pdb code 3nur). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of A Putative Amidohydrolase From Staphylococcus Aureus, PDB code: 3nur:

Calcium binding site 1 out of 1 in 3nur

Go back to Calcium Binding Sites List in 3nur
Calcium binding site 1 out of 1 in the Crystal Structure of A Putative Amidohydrolase From Staphylococcus Aureus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Putative Amidohydrolase From Staphylococcus Aureus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca358

b:6.4
occ:1.00
OD1 A:ASP316 2.1 12.1 1.0
OE1 A:GLU28 2.2 13.9 1.0
O A:HOH593 2.2 15.4 1.0
O A:HOH592 2.3 19.1 1.0
NE2 A:HIS192 2.3 12.8 1.0
NE2 A:HIS30 2.3 10.9 1.0
CG A:ASP316 3.1 12.1 1.0
CD A:GLU28 3.2 17.8 1.0
CD2 A:HIS30 3.2 11.8 1.0
CD2 A:HIS192 3.3 12.7 1.0
CE1 A:HIS192 3.4 12.9 1.0
CE1 A:HIS30 3.4 10.8 1.0
OD2 A:ASP316 3.5 14.8 1.0
CG A:GLU28 3.6 12.7 1.0
OE2 A:GLU28 4.3 11.3 1.0
CB A:ASP316 4.3 9.2 1.0
CG A:HIS30 4.4 11.1 1.0
CG A:HIS192 4.4 11.5 1.0
ND1 A:HIS30 4.5 12.0 1.0
ND1 A:HIS192 4.5 13.0 1.0
O A:HOH507 4.7 29.1 1.0
CA A:ASP316 4.7 7.9 1.0
CD2 A:TYR319 4.8 12.4 1.0
CE1 A:HIS253 4.8 11.5 1.0
CB A:GLU28 4.9 9.9 1.0
NE2 A:HIS253 5.0 12.2 1.0

Reference:

W.Qiu, R.Lam, V.Romanov, K.Lam, M.Soloveychik, E.F.Pai, N.Y.Chirgadze. Crystal Structure of A Putative Amidohydrolase From Staphylococcus Aureus To Be Published.
Page generated: Sat Jul 13 15:11:16 2024

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