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Calcium in PDB 3nze: The Crystal Structure of A Domain of A Possible Sugar-Binding Transcriptional Regulator From Arthrobacter Aurescens TC1.

Protein crystallography data

The structure of The Crystal Structure of A Domain of A Possible Sugar-Binding Transcriptional Regulator From Arthrobacter Aurescens TC1., PDB code: 3nze was solved by K.Tan, R.Zhang, L.Bigelow, K.Buck, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.00 / 1.70
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 41.337, 86.286, 64.641, 90.00, 94.75, 90.00
R / Rfree (%) 16.8 / 19.9

Calcium Binding Sites:

The binding sites of Calcium atom in the The Crystal Structure of A Domain of A Possible Sugar-Binding Transcriptional Regulator From Arthrobacter Aurescens TC1. (pdb code 3nze). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the The Crystal Structure of A Domain of A Possible Sugar-Binding Transcriptional Regulator From Arthrobacter Aurescens TC1., PDB code: 3nze:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 3nze

Go back to Calcium Binding Sites List in 3nze
Calcium binding site 1 out of 2 in the The Crystal Structure of A Domain of A Possible Sugar-Binding Transcriptional Regulator From Arthrobacter Aurescens TC1.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Crystal Structure of A Domain of A Possible Sugar-Binding Transcriptional Regulator From Arthrobacter Aurescens TC1. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca1

b:21.4
occ:1.00
OE2 B:GLU170 2.4 19.8 1.0
OE1 B:GLU170 2.6 20.4 1.0
CD B:GLU170 2.9 21.2 1.0
NH1 B:ARG168 4.1 45.1 1.0
O B:HOH459 4.1 39.8 1.0
CG B:GLU170 4.4 15.3 1.0
O B:HOH350 4.5 27.0 1.0
NH2 B:ARG168 4.6 26.8 1.0
CZ B:ARG168 4.8 39.2 1.0

Calcium binding site 2 out of 2 in 3nze

Go back to Calcium Binding Sites List in 3nze
Calcium binding site 2 out of 2 in the The Crystal Structure of A Domain of A Possible Sugar-Binding Transcriptional Regulator From Arthrobacter Aurescens TC1.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of The Crystal Structure of A Domain of A Possible Sugar-Binding Transcriptional Regulator From Arthrobacter Aurescens TC1. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca2

b:49.5
occ:1.00
O B:THR148 2.7 45.2 1.0
OG1 B:THR148 2.7 48.1 1.0
C B:THR148 3.6 42.3 1.0
CB B:THR148 3.9 37.8 1.0
CA B:THR148 4.4 44.3 1.0
N B:THR149 4.4 36.7 1.0
O B:GLN147 4.5 43.0 1.0
CA B:THR149 4.5 32.7 1.0
CG2 B:THR149 4.5 31.7 1.0
CB B:THR149 4.8 42.2 1.0

Reference:

K.Tan, R.Zhang, L.Bigelow, K.Buck, A.Joachimiak. The Crystal Structure of A Domain of A Possible Sugar-Binding Transcriptional Regulator From Arthrobacter Aurescens TC1. To Be Published.
Page generated: Sat Jul 13 15:11:17 2024

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