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Calcium in PDB 3o0v: Crystal Structure of the Calreticulin Lectin Domain

Protein crystallography data

The structure of Crystal Structure of the Calreticulin Lectin Domain, PDB code: 3o0v was solved by G.Kozlov, K.Gehring, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.79 / 2.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 43.111, 75.320, 79.587, 90.00, 90.00, 90.00
R / Rfree (%) 21.4 / 27.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Calreticulin Lectin Domain (pdb code 3o0v). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Calreticulin Lectin Domain, PDB code: 3o0v:

Calcium binding site 1 out of 1 in 3o0v

Go back to Calcium Binding Sites List in 3o0v
Calcium binding site 1 out of 1 in the Crystal Structure of the Calreticulin Lectin Domain


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Calreticulin Lectin Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1

b:27.5
occ:1.00
O A:LYS62 2.4 32.3 1.0
O A:GLN26 2.4 31.9 1.0
O A:HOH383 2.4 25.9 1.0
O A:HOH384 2.5 34.4 1.0
OD1 A:ASP328 2.5 21.9 1.0
O A:LYS64 2.6 28.3 1.0
OD2 A:ASP328 2.6 22.5 1.0
CG A:ASP328 2.9 22.4 1.0
C A:GLN26 3.5 31.7 1.0
C A:LYS62 3.5 32.9 1.0
C A:LYS64 3.7 28.5 1.0
N A:LYS64 3.9 30.0 1.0
CA A:GLN26 4.1 31.3 1.0
C A:ASP63 4.1 29.7 1.0
CA A:ASP63 4.2 30.4 1.0
N A:ASP63 4.2 32.1 1.0
ND2 A:ASN329 4.3 24.7 1.0
CA A:LYS64 4.3 29.6 1.0
CB A:GLN26 4.4 32.1 1.0
O A:HOH387 4.4 22.0 1.0
O A:PHE27 4.4 34.0 1.0
CB A:ASP328 4.4 21.5 1.0
CA A:LYS62 4.5 34.7 1.0
N A:PHE27 4.5 31.7 1.0
CB A:PHE27 4.6 31.3 1.0
O A:GLU61 4.6 35.5 1.0
CD2 A:PHE27 4.7 28.4 1.0
C A:PHE27 4.7 33.9 1.0
N A:GLY65 4.7 27.6 1.0
CB A:LYS64 4.8 31.0 1.0
CA A:PHE27 4.8 32.3 1.0
CD2 A:LEU28 4.9 37.6 1.0
O A:ASP63 4.9 28.8 1.0
CG A:ASN329 4.9 23.8 1.0
OD1 A:ASN329 4.9 24.6 1.0

Reference:

G.Kozlov, C.L.Pocanschi, A.Rosenauer, S.Bastos-Aristizabal, A.Gorelik, D.B.Williams, K.Gehring. Structural Basis of Carbohydrate Recognition By Calreticulin. J.Biol.Chem. V. 285 38612 2010.
ISSN: ISSN 0021-9258
PubMed: 20880849
DOI: 10.1074/JBC.M110.168294
Page generated: Sat Dec 12 04:22:50 2020

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